PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KXZ44281.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
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Family | NF-YC | ||||||||
Protein Properties | Length: 213aa MW: 22726.1 Da PI: 8.9751 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 25.9 | 2e-08 | 92 | 157 | 19 | 84 |
NF-YC 19 helPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavt 84 ++lP + +++++ d +v++ + ea + ls a ++f+ + ++ a +krrt++ d++ +v KXZ44281.1 92 TTLPASWVRRVVSLDHEVNRCTGEALMALSAAADVFLTAVCAKATAAAAGAKRRTVRLDDVDRCVR 157 579**********************************************************99885 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50118 | 13.494 | 1 | 73 | IPR009071 | High mobility group box domain |
Gene3D | G3DSA:1.10.30.10 | 1.3E-16 | 2 | 70 | IPR009071 | High mobility group box domain |
SMART | SM00398 | 2.5E-9 | 2 | 74 | IPR009071 | High mobility group box domain |
CDD | cd01390 | 4.17E-16 | 3 | 68 | No hit | No description |
SuperFamily | SSF47095 | 2.23E-16 | 3 | 71 | IPR009071 | High mobility group box domain |
Pfam | PF00505 | 2.2E-12 | 3 | 71 | IPR009071 | High mobility group box domain |
SuperFamily | SSF47113 | 1.62E-11 | 91 | 157 | IPR009072 | Histone-fold |
Gene3D | G3DSA:1.10.20.10 | 4.7E-11 | 91 | 157 | IPR009072 | Histone-fold |
Pfam | PF00808 | 1.7E-6 | 93 | 156 | IPR003958 | Transcription factor CBF/NF-Y/archaeal histone domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence Send to blast |
MAPPSAYMLF CNENREAARQ KLASEGHEKM PVTMVAKELG QMWKALNDED RAKFRARAEE 60 LLKQWKQEHP EQPGEQDAEG GAAAPAGAQL PTTLPASWVR RVVSLDHEVN RCTGEALMAL 120 SAAADVFLTA VCAKATAAAA GAKRRTVRLD DVDRCVRGDK RLVAVGLTAV LSMVSASASA 180 AEDLKAAAPP GKKPKLDKPE VAANNIKRAF GLA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002957240.1 | 4e-66 | hypothetical protein VOLCADRAFT_98278 | ||||
TrEMBL | A0A150G3B1 | 1e-151 | A0A150G3B1_GONPE; Uncharacterized protein | ||||
STRING | XP_002957240.1 | 2e-65 | (Volvox carteri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP4674 | 11 | 11 |