PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ44266.1
Organism
Gonium pectorale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family C2H2
Protein Properties Length: 932aa    MW: 94753.6 Da    PI: 10.4242
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ44266.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.80.0016251270323
                 ETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                 Cp+C ++F r++ ++rH +++
  KXZ44266.1 251 CPICARTF-RPDAFERHAKVC 270
                 ********.********9987 PP
2zf-C2H211.50.00092410430223
                 EETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                 +Cp+C ++F r++ ++rH +++
  KXZ44266.1 410 SCPICARTF-RPDAFERHAKVC 430
                 6********.********9987 PP
3zf-C2H211.20.0011633653223
                 EETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                 +C++Cg+   r++ L +H+r++
  KXZ44266.1 633 PCGNCGRKM-RPDALAKHQRMC 653
                 5********.**********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139130.0098174195No hitNo description
SMARTSM007340.67248271IPR006642Zinc finger, Rad18-type putative
PfamPF139132.8E-8248270No hitNo description
PfamPF139130.0098334355No hitNo description
SMARTSM007340.64408431IPR006642Zinc finger, Rad18-type putative
PfamPF139134.4E-8408430No hitNo description
PfamPF139133.9E-4489508No hitNo description
SMARTSM007345.7561584IPR006642Zinc finger, Rad18-type putative
PfamPF139130.0013561583No hitNo description
PfamPF139131.2E-4630653No hitNo description
PfamPF139131.5E-6746769No hitNo description
SMARTSM007340.051880903IPR006642Zinc finger, Rad18-type putative
PfamPF139132.0E-6880902No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006281Biological ProcessDNA repair
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 932 aa     Download sequence    Send to blast
MNPGFTFDTP SRGGGAGRSV LDTYGSASSQ AQQGGLRPTS AQRGGPSGYG GRVSSSGGGA  60
ALYSSNSGGS TVLPGGPASR GAAWAGGGGG GGGAGGKLPI SQRLAQVKAV YNAAKFNRSL  120
DSLLRGGTAT SRPEVRAAVT SGAAGGGGGG TMRGGAGRPV TPPRREGQRP VGFTCYLCGQ  180
QYGSQSLMMH IPQCQKKWVM VESQKPKREQ RPLPPPPPEL SGGALPNTPE GIQDFNSRMY  240
SYWDKVSLVA CPICARTFRP DAFERHAKVC TPDNPGGPLG PNKHAPQRPP SARAGGAGGG  300
AGYGGSGGGS GGGAGASPSR APPRREGQRP VGFTCYLCGQ QYGSQSLMMH IPQCQKKWVM  360
VESQKPKREQ RPLPPPPPEL SGGALPNTPE GIQDFNSRMY SYWDKVSLVS CPICARTFRP  420
DAFERHAKVC TPDNPGGPLG PNKHAPPKTA GGPGGVGGGA AGAARPSSAS RGGGTPPRRE  480
GERPRAYVCY LCGQQFGSQS LPIHIPQCYE KWLKVEANKA PKERRPPPPP PPELDHPLPT  540
RAAEIDEFNS KMFGYYNGVS LVPCPNCGRT MRPEALRAHS KGCTPEKPMA RPGGAAGAAA  600
GRTGGGGGGG GGGGGAGYGP SEYDDGAAGE LEPCGNCGRK MRPDALAKHQ RMCTPDKPMK  660
AVRPAGGAQA AAGPAAAGGG SGGGGGGGGG TGKPVGARPM SGRPASARGG GGGGGGADYQ  720
DGPEPPKVSY NLPADAGGYD DDGGEERIQC GSCGRRFLAE ALEKHSRVCA KVFAGKRKVF  780
NSAAKRVAGT DAAAYVNPRA MAAPPGRPAP PSGPAPSSGR GRGGRVSAAG GGAGGVPKWK  840
AQSHALRQAM AEMRKVGAAL ARGEDIRNIP HVPSAPDPSL VQCPSCGRRY NAQAAERHIP  900
RCASIVARPK FLKAGTGGAG KGAPDSKQLP RW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1680690SGGGGGGGGGT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_001692001.10.0predicted protein
TrEMBLA0A150G3160.0A0A150G316_GONPE; Uncharacterized protein
STRINGEDP044910.0(Chlamydomonas reinhardtii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP778756