PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KXZ43041.1

Organism

Gonium pectorale

Taxonomic ID

33097

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium

Family

bHLH

Protein Properties

Length: 443aa MW: 46981.2 Da PI: 5.0433

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KXZ43041.1	genome	GPGRP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40	7.1e-13	223	281	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC..........TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkas.......kapskKlsKaeiLekAveYIksLq 55 +h+ +E++RRdriNs ++eLrel+P++ + + K +L +++ +k+Lq KXZ43041.1 223 SHSTVEKQRRDRINSLIDELRELVPPQQrsnnsgaEGLEARRPKHVVLADTIQLLKHLQ 281 8***********************777999988889999**************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	13.135	219	280	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.46E-11	221	285	No hit	No description
SuperFamily	SSF47459	2.88E-12	222	296	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	3.8E-10	223	281	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	5.7E-12	223	285	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.9E-8	225	286	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF55021	2.12E-9	356	418	No hit	No description
Gene3D	G3DSA:3.30.70.260	1.4E-6	359	417	No hit	No description
PROSITE profile	PS51671	10.333	359	437	IPR002912	ACT domain
CDD	cd04873	8.18E-9	360	423	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0008152	Biological Process	metabolic process
GO:0016597	Molecular Function	amino acid binding
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence Send to blast
MGDASLDFGF GDSQYVFTDR ELNELLGVIE QKAAGAEADL EVLDFFRKEE PLALQFQPRS 60 HKDSGLDASL PVIKQEELPM SALSSALASP VETPALQQSA AEQPFLSSAA AEISILPMPT 120 AAALQAFALP GTGGLVGAGA GAGVSPFMHV LAQQAPQPPA PQPPAPAVAS LAAPAPQPPT 180 LAQLLPSPTP ATSSAVVMPR FPSVPVPSKA CTVNGPELKG QISHSTVEKQ RRDRINSLID 240 ELRELVPPQQ RSNNSGAEGL EARRPKHVVL ADTIQLLKHL QHKLQVTTHE NGYPQQVGAP 300 GGRVGVGMGD DDTANSEGKS KSSSHEDVEM GGAPQMPHIP CQMTQNAGVT VERGPDCYYV 360 QVKCRDRKGL LSDIINALRQ LPLEIRTAAV TTTNGTVRDV FEVKLDDPGL SPEDVQNLVH 420 DALFQQPLLV PAAYEAMTKR PRA

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence Send to blast

MGDASLDFGF GDSQYVFTDR ELNELLGVIE QKAAGAEADL EVLDFFRKEE PLALQFQPRS  60
HKDSGLDASL PVIKQEELPM SALSSALASP VETPALQQSA AEQPFLSSAA AEISILPMPT  120
AAALQAFALP GTGGLVGAGA GAGVSPFMHV LAQQAPQPPA PQPPAPAVAS LAAPAPQPPT  180
LAQLLPSPTP ATSSAVVMPR FPSVPVPSKA CTVNGPELKG QISHSTVEKQ RRDRINSLID  240
ELRELVPPQQ RSNNSGAEGL EARRPKHVVL ADTIQLLKHL QHKLQVTTHE NGYPQQVGAP  300
GGRVGVGMGD DDTANSEGKS KSSSHEDVEM GGAPQMPHIP CQMTQNAGVT VERGPDCYYV  360
QVKCRDRKGL LSDIINALRQ LPLEIRTAAV TTTNGTVRDV FEVKLDDPGL SPEDVQNLVH  420
DALFQQPLLV PAAYEAMTKR PRA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002957601.1	0.0	hypothetical protein VOLCADRAFT_98692
TrEMBL	A0A150FZK3	0.0	A0A150FZK3_GONPE; Uncharacterized protein
STRING	XP_002957601.1	0.0	(Volvox carteri)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP3455	10	13