PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ42748.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family MYB
Protein Properties Length: 737aa    MW: 76162.2 Da    PI: 5.4964
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ42748.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.62.9e-1380141146
                      TSSS-HHHHHHHHHHHHHTTTT.................-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg.................tWktIartmgkgRtlkqcksrwqk 46 
                      r +WT+  +++lv+av+                      +W+++a+ ++ gRt+kqc++rw++
       KXZ42748.1  80 RRPWTQSQHDRLVKAVEAQQRAllaagempdgsdgdgriNWTLVAESVP-GRTGKQCRERWHN 141
                      679****************966***************************.***********98 PP

2Myb_DNA-binding34.64.3e-11150192145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      rg W +eEd  ++++++++G   W++I+r +  +Rt++q+k+rw 
       KXZ42748.1 150 RGQWAEEEDRVIARGHAMWGAA-WTRISRNLE-RRTENQVKNRWS 192
                      899*******************.*********.***********6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466896.17E-672141IPR009057Homeodomain-like
PROSITE profilePS500909.09475143IPR017877Myb-like domain
SMARTSM007171.7E-1079145IPR001005SANT/Myb domain
PfamPF002493.2E-1080141IPR001005SANT/Myb domain
CDDcd001671.78E-882141No hitNo description
Gene3DG3DSA:1.10.10.604.0E-1682152IPR009057Homeodomain-like
SuperFamilySSF466891.62E-19123197IPR009057Homeodomain-like
PROSITE profilePS5129418.435145199IPR017930Myb domain
SMARTSM007171.1E-7149197IPR001005SANT/Myb domain
PfamPF002499.8E-10150192IPR001005SANT/Myb domain
CDDcd001672.84E-7153191No hitNo description
Gene3DG3DSA:1.10.10.606.0E-14153196IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 737 aa     Download sequence    Send to blast
MMSTRAGQVY DEDARVWASG VDGLSSAESN PAGRTDQQDD DSESFDMDED EPSLDTGDDE  60
PSARLYGAAG RTTASGGARR RPWTQSQHDR LVKAVEAQQR ALLAAGEMPD GSDGDGRINW  120
TLVAESVPGR TGKQCRERWH NACSRPNAVR GQWAEEEDRV IARGHAMWGA AWTRISRNLE  180
RRTENQVKNR WSTIARAARK QPPRLPSISV AAPPPPAAAT TTTIGSQATT AIETDNRSYS  240
AVTKEPDSGG AATANPSVSG QQAPAPAAPE GVIAFDPTLP LGAFLPPSAS ASPSSPIAAA  300
AEVRCTTTAP ASDSRAPDGE IVRVGSVGSL LSPAGPGPYL TDWHGSQTPL AGASSGSPFT  360
SGGRKRSLGA SRLGLLGSSN PDQPFSATAE AGGSHAQAAP GHILDEQLCA GVDGSPMKRV  420
RSEPTALART DSGFAAHSGG GGGGKGAAGK RLIEAAAEAL SRSASDSVTL PSALVRMLLE  480
LAKQHESLLQ LTRTASHAAA EAGAAATAVA ATAGGYLPQS PLPLSLLQAQ LHPAPYELPW  540
PHPDHTQSLV KGAVNQQPQP QPQPQPQQPG AEYFEALRQA RQRQLMMERA GDLKLALPAG  600
SADNAALQSA GGEGLLGEGV CGHTEHQDPR VRDLMDEVDT CNDDNDWLAN LRIHSFGGMV  660
AQCLRNASDA GASGAGAAGP LVTPPPPPQQ QRQQQQQTVG AAPPPAAAGA AGGPVHTALV  720
SCPTPSEALI QSFLLDI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A1e-20821969106B-MYB
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A150FYT70.0A0A150FYT7_GONPE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP1474122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25230.11e-20myb domain protein 100