PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KXZ42695.1

Organism

Gonium pectorale

Taxonomic ID

33097

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium

Family

GATA

Protein Properties

Length: 970aa MW: 101270 Da PI: 10.5098

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KXZ42695.1	genome	GPGRP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	27.7	3.8e-09	57	87	2	34
GATA 2 snCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 ++Cg+ + p+WRr + ++ +Cn CG+yy ++ KXZ42695.1 57 QHCGVMEAPQWRRIE-KKL-VCNRCGMYYHRHQ 87 49********887.445.8******9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00401	1.8E-4	50	99	IPR000679	Zinc finger, GATA-type
CDD	cd00202	5.39E-7	53	88	No hit	No description
Gene3D	G3DSA:3.30.50.10	3.3E-7	54	88	IPR013088	Zinc finger, NHR/GATA-type
SuperFamily	SSF57716	8.08E-6	57	99	No hit	No description
PROSITE profile	PS50114	8.603	58	86	IPR000679	Zinc finger, GATA-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0008270	Molecular Function	zinc ion binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 970 aa Download sequence Send to blast
MITLDPGYGT SSPDENDEYK PLPKRPAEPK GQQPSDGSGF GNKVPKPLIP GGPCENQHCG 60 VMEAPQWRRI EKKLVCNRCG MYYHRHQRFP DSNYFSGMAS KAATKHHVVM QRSPAAAAVG 120 GPSCDAAGAQ GAPHSTPPPQ QQQPQLPHPA HVQQQPPHPQ AAPLPPAAAA LLPPGAAAAS 180 GAAGLLALLR RAENPGVAPS GEALQRGPLV GRAGPGGGQL DHEAARKLAG LLCERTDLLD 240 RNPQLRQLLL VQQQHEQLQS MQKHKQQQHQ QKQQLNMLLE QLLVQQQKQQ RASHPGQLEV 300 PASPHRGNSP GSPHSDTTVA DMAAAGTTTG DTAAAAAAAT NPSPAAAVAA VNGTLLFPQQ 360 QQQQQRGELP RSLAPAAAAA AAAGAGHGPA PWSSTAAQGM ADQLGLRPSH LQAGAQAQAQ 420 IRVIPASQHQ RLQHHHNHKH SHHAQQGRLE SPVSAATALH SGAPQHARGA AMEPAAKRVR 480 NTAEAQPPHH GGHGLGGQGN GQGLQLQMLH AHQQMQSAAA AEALARSSQP PPPQQRQPQE 540 PQRRASHQEG LPLPNALAAL LQQQQQQLQQ LQQLQQANDQ RRQQEQELRA AQAAEAEVAL 600 QGLQGLQRAQ HLTEQLRLQL PEWQRNSSSS GDQQAQAQAQ QREAARRGSS DRAAAGGPPS 660 LMTTIAAAAA AARQQQQQLL QLQHQHQQHL VEEELRRQLH HEQQQREQQR KGALAEKLRQ 720 QAQAQAQAQA QAQAQGGHHP AHRAPEHPRA QGQGGHHLPP GQHPQAPQGR HAGGGGQQQQ 780 QRLQPADAFL LAAGGGGGNG GGGSLMRDLQ QRSLQHQQPG GHGHGPAGDR LQGRASGNGY 840 SQPRDGGAQA GPGRHADLQA LLGAVLGGEG ARGGGAAVAA TSASSAYHHH QQQQQLDGML 900 GALLARQAQA QAHAQAGVGM GLGMGMMAQG GGAGGGGGLA AQLREGGLGG GALAGLLPVL 960 DLGKPSAVAV

Sequence ? help Back to Top

Protein Sequence Length: 970 aa Download sequence Send to blast

MITLDPGYGT SSPDENDEYK PLPKRPAEPK GQQPSDGSGF GNKVPKPLIP GGPCENQHCG  60
VMEAPQWRRI EKKLVCNRCG MYYHRHQRFP DSNYFSGMAS KAATKHHVVM QRSPAAAAVG  120
GPSCDAAGAQ GAPHSTPPPQ QQQPQLPHPA HVQQQPPHPQ AAPLPPAAAA LLPPGAAAAS  180
GAAGLLALLR RAENPGVAPS GEALQRGPLV GRAGPGGGQL DHEAARKLAG LLCERTDLLD  240
RNPQLRQLLL VQQQHEQLQS MQKHKQQQHQ QKQQLNMLLE QLLVQQQKQQ RASHPGQLEV  300
PASPHRGNSP GSPHSDTTVA DMAAAGTTTG DTAAAAAAAT NPSPAAAVAA VNGTLLFPQQ  360
QQQQQRGELP RSLAPAAAAA AAAGAGHGPA PWSSTAAQGM ADQLGLRPSH LQAGAQAQAQ  420
IRVIPASQHQ RLQHHHNHKH SHHAQQGRLE SPVSAATALH SGAPQHARGA AMEPAAKRVR  480
NTAEAQPPHH GGHGLGGQGN GQGLQLQMLH AHQQMQSAAA AEALARSSQP PPPQQRQPQE  540
PQRRASHQEG LPLPNALAAL LQQQQQQLQQ LQQLQQANDQ RRQQEQELRA AQAAEAEVAL  600
QGLQGLQRAQ HLTEQLRLQL PEWQRNSSSS GDQQAQAQAQ QREAARRGSS DRAAAGGPPS  660
LMTTIAAAAA AARQQQQQLL QLQHQHQQHL VEEELRRQLH HEQQQREQQR KGALAEKLRQ  720
QAQAQAQAQA QAQAQGGHHP AHRAPEHPRA QGQGGHHLPP GQHPQAPQGR HAGGGGQQQQ  780
QRLQPADAFL LAAGGGGGNG GGGSLMRDLQ QRSLQHQQPG GHGHGPAGDR LQGRASGNGY  840
SQPRDGGAQA GPGRHADLQA LLGAVLGGEG ARGGGAAVAA TSASSAYHHH QQQQQLDGML  900
GALLARQAQA QAHAQAGVGM GLGMGMMAQG GGAGGGGGLA AQLREGGLGG GALAGLLPVL  960
DLGKPSAVAV

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A150FZQ0	0.0	A0A150FZQ0_GONPE; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP12335	3	3