PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ42126.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family MYB
Protein Properties Length: 774aa    MW: 81758.7 Da    PI: 4.7319
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ42126.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.21.2e-153682148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT+eEd+ l ++v   G  +W+tIa+ +  gR++k+c++rw ++l
       KXZ42126.1 36 RGPWTPEEDKMLTNLVLTCGAQRWSTIAESIE-GRSGKSCRLRWWNHL 82
                     89******************************.***********8886 PP

2Myb_DNA-binding41.72.7e-1388132147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +g++++ Ed  +v+ ++++G++ W+ Ia+ ++ gRt++ +k+rw++ 
       KXZ42126.1  88 KGPFSEFEDAVIVRSHEKYGNK-WSVIAKLLP-GRTDNAVKNRWNST 132
                      799*******************.*********.***********986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.4453182IPR017930Myb domain
SuperFamilySSF466892.13E-2935129IPR009057Homeodomain-like
SMARTSM007174.5E-153584IPR001005SANT/Myb domain
PfamPF002491.7E-143682IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.609.9E-243789IPR009057Homeodomain-like
CDDcd001671.09E-123882No hitNo description
PROSITE profilePS5129423.81583137IPR017930Myb domain
SMARTSM007179.3E-1487135IPR001005SANT/Myb domain
PfamPF002497.9E-1288132IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.8E-2390136IPR009057Homeodomain-like
CDDcd001678.68E-1090133No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 774 aa     Download sequence    Send to blast
MKSRKANAGR RPALKRSSSF TEDEELEQHD PHGDKRGPWT PEEDKMLTNL VLTCGAQRWS  60
TIAESIEGRS GKSCRLRWWN HLSPQVKKGP FSEFEDAVIV RSHEKYGNKW SVIAKLLPGR  120
TDNAVKNRWN STLKRKHTGG TLNNRFVDTY PELDGLMADP EAAREAAEYS SCLDSYSACA  180
PSSLSAGNGG MWTGSGSEEG DDHEHDEPQQ GHEAEERQLW RGEEPANGGE DAAAAAAPPA  240
PHTHTHNTRR ATSQRLAAAS QRTQPQPQPR AQPTASELQG ENETDAELRT HHHHQASTSR  300
CLSPSQTAAA ARAAAADCMQ QESDLQEEDD NDREELQFRQ LPGQASGMWD PQPPACVVGA  360
DLSDALPAWA ASSAPCELES DLQQLQTACD ASTLTACGLP PLKRARHSPQ QPSPSSPPQQ  420
PSLPAACSFL MPAARPPTSA AAEHDGAACG SSGEGLLDLA SDSASGSGGV AAMPMLICSG  480
SGCSTSGTLP ALPQPAAAFG LGYAAQGCSG GACVQGMAPL PALLDPPEDL EFQTFMDSLD  540
STLDSSLAAP EMFDADEDWA DVVLLEQQQQ QQQQQQLQQA QQQFQLQQQS PQQPCPALPP  600
ALPQQPSNTC GSGLVGVWSL ALQSAPLPVP VQPSLLATGA PLTLHVGLGK WAAPVGACAA  660
SAPAPTPASS WKQRALHQLG VAQPLGAPAP SSSMPWAVQD GARSCLSGPG GCPGGSTAPH  720
WLSPQLQSQQ LQLPTMMPQT VPMLLQQPCY ASVYDMGRGL ACGGAFADPQ AFFV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1mse_C4e-37361364104C-Myb DNA-Binding Domain
1msf_C4e-37361364104C-Myb DNA-Binding Domain
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A150FWZ70.0A0A150FWZ7_GONPE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP1516114
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67300.16e-39myb domain protein r1