PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KXZ41745.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
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Family | Nin-like | ||||||||
Protein Properties | Length: 153aa MW: 17315.3 Da PI: 6.5247 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 55.9 | 8.5e-18 | 2 | 43 | 8 | 49 |
RWP-RK 8 edlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRki 49 e l+++++ pik++AkeLg++l+ K+ CR++G++RWP Rk+ KXZ41745.1 2 ESLRQHYHRPIKAVAKELGLSLSCFKKECRRLGVPRWPARKL 43 789**************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02042 | 2.5E-16 | 1 | 43 | IPR003035 | RWP-RK domain |
PROSITE profile | PS51519 | 16.324 | 1 | 66 | IPR003035 | RWP-RK domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence Send to blast |
MESLRQHYHR PIKAVAKELG LSLSCFKKEC RRLGVPRWPA RKLGCLARMR DTLMRDGRAS 60 QKSKQELLEL MQRNMDEIVN DPNAPMYDTF TRVRHEQYKA RGDGRAGGRA RRHAAGRGGA 120 DDDVEEEDSD EEVEDEEDGE VGEMDKGNGA GGR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 100 | 109 | RGDGRAGGRA |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_001698973.1 | 1e-30 | RWP-RK transcription factor | ||||
TrEMBL | A0A150FX08 | 1e-107 | A0A150FX08_GONPE; Uncharacterized protein | ||||
STRING | EDO99027 | 5e-30 | (Chlamydomonas reinhardtii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP6094 | 2 | 8 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66990.1 | 8e-14 | RWP-RK domain-containing protein |