PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ41543.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family Nin-like
Protein Properties Length: 234aa    MW: 22866.1 Da    PI: 9.8605
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ41543.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK53.74.2e-17157205452
      RWP-RK   4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                 +++ + l+   +lpik++A+e gv+l+  K++CR +G +RWP+Rk++sl
  KXZ41543.1 157 TLTKQALRPRLHLPIKEVASEFGVSLSFFKKQCRALGFRRWPSRKLSSL 205
                 688999****************************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151915.789137225IPR003035RWP-RK domain
PfamPF020421.9E-15157205IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MGCGGGEGEA GGGLANRGGG GGTGVQQDWE MGCGDAEDEA DGGVAADSSR LGLGANDAST  60
SAPAVALPPP PPPPAAGRKT SRRPKAAAPD NSDGGDVDAN WASDGDSGDD GGSNGSTAAA  120
AAAPAATAAR KRGSAASKAA DGGAGGAPRG ARRPQLTLTK QALRPRLHLP IKEVASEFGV  180
SLSFFKKQCR ALGFRRWPSR KLSSLARVRK ALEGDGGGGG GEAAQKALGS ARVN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A150FV961e-157A0A150FV96_GONPE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP609428
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.14e-10RWP-RK domain-containing protein