PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Glyma.19G146500.1.p | ||||||||
Common Name | GLYMA_19G146500 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | G2-like | ||||||||
Protein Properties | Length: 379aa MW: 43208.8 Da PI: 7.9833 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 76.1 | 4.6e-24 | 230 | 284 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k r++Wt++LHe F+ v++LGG+ekA Pk+il++mk + L+++hvkSHLQk R+ Glyma.19G146500.1.p 230 KRRIKWTKDLHEPFMMIVNSLGGPEKAKPKAILDMMKSDLLSISHVKSHLQKCRS 284 689*************************************************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 5.6E-21 | 228 | 285 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 6.09E-11 | 229 | 285 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.7E-18 | 230 | 284 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 379 aa Download sequence Send to blast |
MYQYSSQMYG TDWESYMEIS NLAKVVGSEQ LSFEPTKSPF NIVTTPLQTP PGFCASATKS 60 LVSFQAQQQH THQHQSEVPA WCFEFPKTTT MTTTTADSHM LNIRQASGDN FTTTITIKQD 120 PPSSQFTSSL CRPVAESFFS SSGADCRSSS EKYFKIASYS EKHSCIQPDS IQYYDLYSQE 180 DDTLLRDDAA TDEGPLEISF QRNQREKQAP HRLCGVACVA SSNSASRRGK RRIKWTKDLH 240 EPFMMIVNSL GGPEKAKPKA ILDMMKSDLL SISHVKSHLQ KCRSTIHMHK ALQERSKEGQ 300 RTNGESELQV KIHMQIEESR QLQLEVRRNI CQQLEMQRNL HTLIQQQNQQ LKVMLDYQKE 360 RTKLEKTLYT EIEATVPK* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 6e-15 | 229 | 284 | 1 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 6e-15 | 229 | 284 | 1 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 6e-15 | 229 | 284 | 1 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 6e-15 | 229 | 284 | 1 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 6e-15 | 229 | 284 | 1 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 6e-15 | 229 | 284 | 1 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 6e-15 | 229 | 284 | 1 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 6e-15 | 229 | 284 | 1 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Glyma.19G146500.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006576853.1 | 0.0 | protein PHOSPHATE STARVATION RESPONSE 3 | ||||
Refseq | XP_028225378.1 | 0.0 | protein PHOSPHATE STARVATION RESPONSE 3-like | ||||
TrEMBL | A0A445FGN7 | 0.0 | A0A445FGN7_GLYSO; Myb family transcription factor PHL5 | ||||
TrEMBL | K7MYF6 | 0.0 | K7MYF6_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA19G32841.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF14490 | 10 | 16 | Representative plant | OGRP78 | 17 | 262 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06800.1 | 1e-31 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Glyma.19G146500.1.p |