PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.17G239200.1.p
Common NameGLYMA_17G239200, LOC100786245
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 279aa    MW: 30779.9 Da    PI: 10.3824
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.17G239200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY32.81.4e-10247266322
                          -SS-EEEEEEE--TT-SS-E CS
                 WRKY   3 DgynWrKYGqKevkgsefpr 22 
                          D+y+WrKYGqK++kgs++pr
  Glyma.17G239200.1.p 247 DEYSWRKYGQKPIKGSPHPR 266
                          9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105331.5E-16198243IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.801.3E-10234266IPR003657WRKY domain
PROSITE profilePS5081112.197240266IPR003657WRKY domain
SuperFamilySSF1182903.01E-8241267IPR003657WRKY domain
SMARTSM007745.5E-4245275IPR003657WRKY domain
PfamPF031067.8E-7247267IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MAVSDGNTIA VKEAASAGIH NVEKLVNMIL NQHNEGGSEL EAVADVAVNR FREVISLLEK  60
PITRTTGHAR FRRAPTTVPP VPVVQLQQMV DDDSKHKLQN KTEQKQKQST SAFKVYCPPP  120
SPPLPQNQNH HHQQQPFILP LHKNEANGST TNSHFSTLSG DTESLQRSCL SSGFQISHVS  180
MQGGSFKRKP PLSTNSVKRK CNSTGFPDTK CGSSSVQCHC SKKRKLRLKN VIRVPAISSK  240
TADIPPDEYS WRKYGQKPIK GSPHPRYVDV LLHHSFIS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.17G239200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006601273.10.0probable WRKY transcription factor 7
TrEMBLK7MNM60.0K7MNM6_SOYBN; Uncharacterized protein
STRINGGLYMA17G35750.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2240024
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.14e-52WRKY DNA-binding protein 7