PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.17G074000.1.p
Common NameLOC100127377
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 506aa    MW: 54856.3 Da    PI: 8.9051
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.17G074000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY802.6e-25194250259
                          --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                          +DgynWrKYGqK+vk+ + +rsYYrCt+++C++kk +e++++ ++v+ei+Y++eH h+
  Glyma.17G074000.1.p 194 SDGYNWRKYGQKQVKSPTGSRSYYRCTHSDCCAKK-IECCDDSGHVIEIVYKSEHSHD 250
                          7********************************98.*********************7 PP
2WRKY97.49.3e-31367424259
                          --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                           Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++e++ ++ ++v+itY+g H+h+
  Glyma.17G074000.1.p 367 ADGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSDAVIITYKGVHDHD 424
                          6********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.0E-21188252IPR003657WRKY domain
SuperFamilySSF1182901.28E-20190252IPR003657WRKY domain
SMARTSM007742.1E-24193251IPR003657WRKY domain
PROSITE profilePS5081117.649194252IPR003657WRKY domain
PfamPF031067.7E-18195250IPR003657WRKY domain
Gene3DG3DSA:2.20.25.808.8E-32351426IPR003657WRKY domain
PROSITE profilePS5081131.846361426IPR003657WRKY domain
SuperFamilySSF1182905.62E-27362426IPR003657WRKY domain
SMARTSM007744.6E-35366425IPR003657WRKY domain
PfamPF031061.7E-23368423IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 506 aa     Download sequence    Send to blast
MAQRRSPQPL PEPDTKGNDS HQKPQHNKET DRVAESPSAA ESQRGELRSS DEPRTESNLE  60
TLGRGVSSSV ETLAAQSPTD DLQGSSTALN SGAKAESKET VGSPEKEIID RGAVQPLQTQ  120
TEDRLQVSAC STPLSDLSPT SVTQSLSIVS SPTIPKQKIS TPKVNNAHVP EVDKKNPSGR  180
KTLSSVSIAR TSASDGYNWR KYGQKQVKSP TGSRSYYRCT HSDCCAKKIE CCDDSGHVIE  240
IVYKSEHSHD PPRKTNSIRE NKFLSSSEPI VENSVPEQPI KVLKDADPSI SSKESLQEAP  300
CSTDKKRQNT SNISGNGKVI LKEEHVNEPV PKKRMKKGDL TDMDSPVKPG KKSKFVVHAA  360
GDVGISADGY RWRKYGQKMV KGNPHPRNYY RCTSAGCPVR KHIETAVDNS DAVIITYKGV  420
HDHDMPVPKK RHGPPSAPLV AAAAPASLNS LQVKKSDSPQ NKKISTQWSV DTEGELTGEA  480
LELGGEKAME SARTLLSIGF EIKPC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-25353426174WRKY transcription factor 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.600020.0hypocotyl| leaf
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.17G074000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0312280.0KT031228.1 Glycine max clone HN_CCL_111 WRKY transcription factor (Glyma02g36510.1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001348286.10.0WRKY transcription factor 24
SwissprotP595831e-136WRK32_ARATH; Probable WRKY transcription factor 32
TrEMBLA0A368UK480.0A0A368UK48_SOYBN; Uncharacterized protein
STRINGGLYMA17G08170.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51983456
Representative plantOGRP10318610
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.11e-119WRKY DNA-binding protein 32