PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Glyma.15G211900.1.p | ||||||||
Common Name | GLYMA_15G211900 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | STAT | ||||||||
Protein Properties | Length: 511aa MW: 56248.4 Da PI: 4.9603 | ||||||||
Description | STAT family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | STAT | 201.4 | 7.7e-63 | 222 | 343 | 1 | 122 |
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeip 90 ldvvl++a+gqpv+k+ ev asLlyad+g++ve++ d+eapLL+sydG+efss +rp+kll GrasfklkisqLsskcdnrLf i+f++p Glyma.15G211900.1.p 222 LDVVLSDAFGQPVDKENEVFASLLYADTGAPVENTADDEAPLLASYDGIEFSSCERPSKLLLGRASFKLKISQLSSKCDNRLFLISFCVP 311 8***************************************************************************************** PP STAT 91 klkkypfleavskpirCisrsrntrsssltkk 122 kl +ypflea+s+pirCisrsrntr s+l++k Glyma.15G211900.1.p 312 KLGNYPFLEAYSRPIRCISRSRNTRVSTLVWK 343 **************************999886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF49899 | 1.52E-7 | 26 | 173 | IPR013320 | Concanavalin A-like lectin/glucanase domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 511 aa Download sequence Send to blast |
MDTDAVGSEG YSPLKELRLE IEVKEGTFSL CFWLYLTSST TFPVTIIQQV FSDISESAPF 60 LVIDDNKRIH MLPVLLLHEE APETGNINSW TEVPHATVDF EFLLEKWVHV GCEVCPDHIQ 120 LQINGEIVGE KSLCSLLNKE SGSSHLKKLT LANVGGDGKS VQGYVHNFEI FPIITSIKDC 180 HLKCPPLKLS IDESSVSEIE EESDGVWGIV GGKASCRRNF SLDVVLSDAF GQPVDKENEV 240 FASLLYADTG APVENTADDE APLLASYDGI EFSSCERPSK LLLGRASFKL KISQLSSKCD 300 NRLFLISFCV PKLGNYPFLE AYSRPIRCIS RSRNTRVSTL VWKRSTALHC HSLSQSSAMD 360 DRSLDLQHSS HEAQANPLMK RFRLGQDKTS VSVKADPTIE QPDEECNSHV RTANQVENGF 420 PTSLDGRSAN FIEAEDSPSD SESIGEGKSP LNSMASRRNP ISDMTIFKYC LASLAERSLM 480 LKEIATFASG KEISELANHV SLYSGCSHHG * |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Gma.44108 | 0.0 | cotyledon| hypocotyl| root |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Glyma.15G211900.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015039 | 1e-128 | AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006597986.1 | 0.0 | SH2 domain-containing protein A isoform X2 | ||||
Refseq | XP_028204149.1 | 0.0 | SH2 domain-containing protein A-like isoform X2 | ||||
TrEMBL | K7MCS1 | 0.0 | K7MCS1_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA15G27760.2 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF6710 | 30 | 36 | Representative plant | OGRP5941 | 16 | 18 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78540.1 | 1e-129 | SH2 domain protein B |
Link Out ? help Back to Top | |
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Phytozome | Glyma.15G211900.1.p |