PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.15G083600.1.p
Common NameGLYMA_15G083600, LOC100787474
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 366aa    MW: 41271.1 Da    PI: 7.1324
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.15G083600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.94.1e-3282135255
              G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          prlrWtpeLH++Fv+ave+LGG+e+AtPk +l+lm+v gL+++hvkSHLQ+YR+
  Glyma.15G083600.1.p  82 PRLRWTPELHHSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRS 135
                          8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.2E-3078136IPR009057Homeodomain-like
PROSITE profilePS5129412.3378138IPR017930Myb domain
SuperFamilySSF466894.3E-1580136IPR009057Homeodomain-like
TIGRFAMsTIGR015571.0E-2282137IPR006447Myb domain, plants
PfamPF002492.4E-983134IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    Send to blast
MPEGYEIHDN EETSSGCSSS FDLNEELACS EDNSDTEECC ELTTTNEKAK DEGTSANGSS  60
ISSREGNERR GTVRQYVRSK MPRLRWTPEL HHSFVHAVER LGGQERATPK LVLQLMNVRG  120
LSIAHVKSHL QMYRSKKLDE VGQVLSQTSK SNQEVARRPL ILHQCIIPQQ HLMMGNGGII  180
LASNFNKHNH FPSLLHPSFS LSRSQTNDSD SRHQHWYTNH QDFSIPIASS QIQPKDTRGR  240
IAPMRPSQLL EEKRWPPLEI LNNHQSMLKR LPAIVAPKNG SQAVQPAEWS FVNNTSIRDY  300
LSNNSNEPLN NSNSLKLEFD PPFRIKKDEQ QLPDLQLGLS HTVGTDGKID HYKETPEIST  360
KLSLS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A6e-1983137458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B6e-1983137458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A7e-1983137357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B7e-1983137357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C7e-1983137357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D7e-1983137357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A6e-1983137458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C6e-1983137458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D6e-1983137458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F6e-1983137458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H6e-1983137458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J6e-1983137458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.15G083600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006597479.10.0uncharacterized protein LOC100787474
RefseqXP_014622951.10.0uncharacterized protein LOC100787474
RefseqXP_028203492.10.0uncharacterized protein LOC114387494
RefseqXP_028203493.10.0uncharacterized protein LOC114387494
TrEMBLA0A445GQR70.0A0A445GQR7_GLYSO; Putative Myb family transcription factor isoform A
TrEMBLI1MET00.0I1MET0_SOYBN; Uncharacterized protein
STRINGGLYMA15G08970.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF30123270
Representative plantOGRP28515123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.11e-36G2-like family protein