PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Glyma.15G075800.2.p | ||||||||
Common Name | GLYMA_15G075800 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | Dof | ||||||||
Protein Properties | Length: 249aa MW: 26400 Da PI: 10.3916 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 42.5 | 1.4e-13 | 4 | 30 | 36 | 62 |
zf-Dof 36 CrryWtkGGalrnvPvGggrrknkkss 62 rryWt+GG+lrnvPvGgg+rk k+++ Glyma.15G075800.2.p 4 FRRYWTQGGTLRNVPVGGGCRKGKRAK 30 59********************99976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 3.0E-7 | 5 | 28 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 9.4E-9 | 5 | 28 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence Send to blast |
MHKFRRYWTQ GGTLRNVPVG GGCRKGKRAK SSNSSSSENM NSSSRSLPQQ QQQPQGVVVQ 60 TQAPPLTTVV KAKDPSSVVA STFYQSGGYL SSLAAMHSLN SSSHPFDHSL NFAGSDTLRS 120 SNLGLLSGFN VQRPIGPIRP PHLYHQMGSG EREMVSLYEQ GLVNPSSSSM ANTDTNSSGV 180 SQHDWPMSFI NNNNNNASNR ASDASLWSTI STTVGGNAER TSPSGVGAGS SSFVKNQWPN 240 LPGYGPPP* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Glyma.15G075800.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC235268 | 0.0 | AC235268.1 Glycine max strain Williams 82 clone GM_WBb0044I02, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006597450.1 | 1e-176 | dof zinc finger protein DOF1.6 | ||||
Refseq | XP_028202866.1 | 1e-176 | dof zinc finger protein DOF1.6-like | ||||
TrEMBL | A0A0R0G6G8 | 1e-179 | A0A0R0G6G8_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA15G08230.1 | 1e-175 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60850.1 | 6e-10 | OBF binding protein 4 |
Link Out ? help Back to Top | |
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Phytozome | Glyma.15G075800.2.p |