PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.15G049000.1.p
Common NameGLYMA_15G049000, LOC100807974
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 131aa    MW: 15075.4 Da    PI: 10.5259
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.15G049000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.44.7e-164990445
                         XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                         l+++rr++kNRe+A rsR+RK+a++ eLe  v  Le+eN  L
  Glyma.15G049000.1.p 49 LQKQRRMIKNRESAARSRERKQAYTVELESLVTHLEEENAVL 90
                         89*************************************866 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.8E-1046110IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.0254890IPR004827Basic-leucine zipper domain
PfamPF001701.6E-144891IPR004827Basic-leucine zipper domain
CDDcd147078.27E-155093No hitNo description
SuperFamilySSF579598.75E-115095No hitNo description
Gene3DG3DSA:1.20.5.1701.4E-135195No hitNo description
PROSITE patternPS0003605368IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    Send to blast
MAEVVAGTES EDNMSMSLQD LLGSHSHGGR RVKRKSVVEE PLVVDKVTLQ KQRRMIKNRE  60
SAARSRERKQ AYTVELESLV THLEEENAVL LQLAADRKRL RLNQLMECLI PVEEKRIPKR  120
MLRRVNSSQW *
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.354941e-120root
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.15G049000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0922841e-104BT092284.1 Soybean clone JCVI-FLGm-10F13 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003547064.16e-89G-box-binding factor 4
SwissprotP427773e-26GBF4_ARATH; G-box-binding factor 4
TrEMBLI1MDS21e-87I1MDS2_SOYBN; Uncharacterized protein
STRINGGLYMA15G05440.12e-88(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Representative plantOGRP8662715
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.11e-30bZIP family protein