PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Glyma.14G186100.1.p | ||||||||
Common Name | GLYMA_14G186100, LOC100797129 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | WRKY | ||||||||
Protein Properties | Length: 241aa MW: 26970.3 Da PI: 9.1682 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 76.6 | 2.9e-24 | 133 | 193 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dD + WrKYGqK v ++efprsY+rC ++ gC++ k+v+r++e+p++ itY g H+++ Glyma.14G186100.1.p 133 DDNHVWRKYGQKRVLNTEFPRSYFRCGYKydqGCKANKQVQRDQENPNMYRITYIGIHTCN 193 8***************************99999**************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.6E-23 | 122 | 193 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.09E-23 | 129 | 194 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.9E-33 | 132 | 194 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 19.577 | 132 | 195 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.3E-22 | 133 | 192 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence Send to blast |
MNNIVCFASE ISVSTQKKRV IIEELLKGQE AATQLKVLLL EKPFWSEAFL SFQEVMDNVL 60 RSFSEALSIL NSSSSSEPAG SAAEVAHRSL LNSGQNGSPV AASGEKRFQK DGRGRYNRRK 120 SAVSWTILSC TIDDNHVWRK YGQKRVLNTE FPRSYFRCGY KYDQGCKANK QVQRDQENPN 180 MYRITYIGIH TCNATPKATH SATDSNTWES FLLNSDGEVP NSPSLTIKQQ FPKENTSSLI 240 * |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 3e-21 | 132 | 192 | 8 | 68 | OsWRKY45 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Glyma.14G186100.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006596397.1 | 0.0 | probable WRKY transcription factor 70 | ||||
TrEMBL | K7M7W8 | 1e-180 | K7M7W8_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA14G36446.1 | 1e-180 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4700 | 30 | 56 | Representative plant | OGRP14 | 17 | 875 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 9e-33 | WRKY DNA-binding protein 70 |
Link Out ? help Back to Top | |
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Phytozome | Glyma.14G186100.1.p |
Entrez Gene | 100797129 |