PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Glyma.14G186000.1.p | ||||||||
Common Name | GLYMA_14G186000, LOC100796599 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | WRKY | ||||||||
Protein Properties | Length: 304aa MW: 33919.9 Da PI: 7.3259 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 76.7 | 2.7e-24 | 125 | 185 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dD + WrKYGqK v +sefprsY+rC ++ gC +kk+v+r++e+ ++ +tY g H+++ Glyma.14G186000.1.p 125 DDNHVWRKYGQKGVLNSEFPRSYFRCGHKydqGCLAKKQVQRDQENSNMYRTTYIGIHTCN 185 8***************************99999**************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 3.0E-23 | 119 | 186 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.22E-23 | 122 | 186 | IPR003657 | WRKY domain |
SMART | SM00774 | 6.8E-34 | 124 | 186 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.6E-22 | 125 | 184 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 20.139 | 125 | 187 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 304 aa Download sequence Send to blast |
MNNSLCPESE ISISAKKNRM IMKELVKGQE SATQLKVLLE KPFGSEGSLS CQELTANVLR 60 SFTQAISIIN SSSADEVAHR SLLNSGQNGS PVAVSGENRS QKGGRGRYNR RKSAVSWSIL 120 SCTTDDNHVW RKYGQKGVLN SEFPRSYFRC GHKYDQGCLA KKQVQRDQEN SNMYRTTYIG 180 IHTCNATTKA THSATDLLNS DHDSEVPNVQ DHHISPPSLN IKQTFPKENT PSDVTDHMLN 240 PSMWSALKDF EPSNKPTIVP LMMETDTNNV DNVYSSQRLD MDFRVPSVHF GTDFPFDEGH 300 FLI* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 4e-20 | 118 | 184 | 2 | 68 | OsWRKY45 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Glyma.14G186000.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003544262.1 | 0.0 | probable WRKY transcription factor 70 | ||||
TrEMBL | K7M7W6 | 0.0 | K7M7W6_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA14G36438.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4700 | 30 | 56 | Representative plant | OGRP14 | 17 | 875 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 2e-38 | WRKY DNA-binding protein 70 |
Link Out ? help Back to Top | |
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Phytozome | Glyma.14G186000.1.p |
Entrez Gene | 100796599 |