PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Glyma.14G185800.1.p | ||||||||
Common Name | GLYMA_14G185800, LOC100796071 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | WRKY | ||||||||
Protein Properties | Length: 330aa MW: 37387.3 Da PI: 6.5607 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 78.5 | 7.5e-25 | 127 | 187 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dD ++WrKYGqK + +sefprsY+rC+++ gC++ k+v+ ++e+p+++++tY g H+++ Glyma.14G185800.1.p 127 DDNHAWRKYGQKRILNSEFPRSYFRCSHKydqGCRAIKQVQVDQENPNMLQTTYIGIHTCN 187 8***************************99999**************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 7.0E-24 | 123 | 187 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.83E-23 | 123 | 187 | IPR003657 | WRKY domain |
SMART | SM00774 | 6.6E-34 | 126 | 188 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.5E-23 | 127 | 186 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 18.441 | 127 | 189 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 330 aa Download sequence Send to blast |
MNNIICAESE SEISISAKNK RMIMKELVKG QESATQLKVL LEKPFGSEGS LSCQELTANV 60 LRSFTQAISI INSSSADEVA HRSLLNSGQN GSPVAVSGEN RSQKGRRGRY NRRKNALTWT 120 ILSCTTDDNH AWRKYGQKRI LNSEFPRSYF RCSHKYDQGC RAIKQVQVDQ ENPNMLQTTY 180 IGIHTCNGTP MATHSAIGSS STEWESSYLL NFDHHDSKVP NVQDHHISSP NLTIKQEFPK 240 EDTHSDVADH KYSDPNLWSD LKDFQPFKPT IMPFRMESDN NNNNNTNADN VHSSCTDYQR 300 LNMNFEMASV HFDTDFHFDE SHFDESPLL* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 3e-18 | 127 | 186 | 9 | 68 | OsWRKY45 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Glyma.14G185800.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003544261.1 | 0.0 | probable WRKY transcription factor 70 | ||||
TrEMBL | K7M7W5 | 0.0 | K7M7W5_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA14G36430.2 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4700 | 30 | 56 | Representative plant | OGRP14 | 17 | 875 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 6e-35 | WRKY DNA-binding protein 70 |
Link Out ? help Back to Top | |
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Phytozome | Glyma.14G185800.1.p |
Entrez Gene | 100796071 |