PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.14G103100.1.p
Common NameGLYMA_14G103100, LOC100810978
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 283aa    MW: 31665.8 Da    PI: 8.4646
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.14G103100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.43.8e-30131188258
                          --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 
                           Dgy+WrKYGqK+ ++++ pr+Y+rC+sa +Cpvkkkv+rs edp+++++tYegeHnh
  Glyma.14G103100.1.p 131 MDGYQWRKYGQKVTRDNPSPRAYFRCSSApSCPVKKKVQRSLEDPTILVTTYEGEHNH 188
                          6**************************999**************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.9E-29122189IPR003657WRKY domain
PROSITE profilePS5081125.798125191IPR003657WRKY domain
SuperFamilySSF1182904.97E-25128190IPR003657WRKY domain
SMARTSM007742.7E-34130190IPR003657WRKY domain
PfamPF031068.9E-25132188IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MEYVDTSLNL NVDPSSMHMD GVLVEELRRL SCENKRLTGM LTHLCENYKA LQKQLSQLIN  60
TNFEQLDPIE SRKRKAESDQ WCTNKFIGVN NAECSSITED SFRKYKDFNS SPKVSKVLVK  120
TEASNNSLYV MDGYQWRKYG QKVTRDNPSP RAYFRCSSAP SCPVKKKVQR SLEDPTILVT  180
TYEGEHNHGH QRAEISLVSN QREAPPKGSS PVSSPTPTIR SAACPTVTFD LVKSGLVELE  240
SAQKSSIQQF LVQQMATSLT RDTNFTTALA TAISGKILEA QW*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-20115188171WRKY transcription factor 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.251910.0flower| leaf
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.14G103100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU0195701e-153EU019570.1 Glycine max WRKY30 (WRKY30) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003545409.10.0probable WRKY transcription factor 40
RefseqXP_028199686.10.0probable WRKY transcription factor 40
TrEMBLA0A0B2RQX20.0A0A0B2RQX2_GLYSO; Putative WRKY transcription factor 40
TrEMBLI1M9970.0I1M997_SOYBN; Uncharacterized protein
STRINGGLYMA14G11960.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF97334115
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.16e-75WRKY DNA-binding protein 40