PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.14G084200.2.p
Common NameGLYMA_14G084200, LOC100785332
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 268aa    MW: 29336.7 Da    PI: 7.1691
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.14G084200.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.78.9e-131061451155
                          HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          rRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  Glyma.14G084200.2.p 106 RRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 145
                          8******************7.....5******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.25395144IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.79E-15100149No hitNo description
SMARTSM003536.1E-15102150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.1E-16104155IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.85E-16106155IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.2E-10106145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MAGDIGRALP PPDSEEFSTL FNQLLHNSPP LGMDPNHSPS DFTPHNTTIN INSNNNNNTV  60
PSSPSNFNFS DPHHYIPASD ATTFKQHNIN HNNNHTPDFT SSHVERRRSR INEKMKALQN  120
LIPNSNKTDK ASMLDEAIEY LKQLQLQVQM LMMRNGLSLH PMSLPGGLRP MIMPQTGLNL  180
DGSNGFQNST CAIASSSNDE SLVRHAFSFP KQCSISNKSI GVPSVKNIAT SDTSSTFHPS  240
IKDALYGNMP QPFMDTTKIG KPSPDVS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.14G084200.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014622039.10.0transcription factor ALC isoform X3
RefseqXP_028199952.10.0transcription factor ALC-like isoform X3
TrEMBLK7M5M80.0K7M5M8_SOYBN; Uncharacterized protein
STRINGGLYMA14G09231.11e-169(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.12e-22bHLH family protein