PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.14G070000.1.p
Common NameGLYMA_14G070000, LOC100794497
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 284aa    MW: 30766.8 Da    PI: 6.5092
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.14G070000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.25.7e-203483255
                  AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                          ykGVr++  +g+WvAeIr+p   + r +r +lg+f+ta eAa a++aa++kl+g
  Glyma.14G070000.1.p 34 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFDTAREAALAYDAAARKLYG 83
                         69****999.**********8...3.35*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.86E-213393No hitNo description
PfamPF008474.1E-143483IPR001471AP2/ERF domain
SuperFamilySSF541712.29E-213490IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.2E-303492IPR001471AP2/ERF domain
PROSITE profilePS5103222.1553491IPR001471AP2/ERF domain
SMARTSM003803.8E-353497IPR001471AP2/ERF domain
PRINTSPR003674.9E-103546IPR001471AP2/ERF domain
PRINTSPR003674.9E-105773IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MGIQERKKVK KPAQASSRKG CMRGKGGPEN AKCTYKGVRQ RTWGKWVAEI REPNRGARLW  60
LGTFDTAREA ALAYDAAARK LYGPDAKLNL AELSVPAPAL AAVNPSHMQQ QPQVVPEMLI  120
QQQQPLVHPT FDLVNVTSHP SGFNNILNNN PVVVSSMASS FLADAAVPVY TSCDSILSLP  180
SATTNYTNTN TVPMEMENYS SSIPTVESNG DNMFRSFWGP TMDDTMPVFD QSIWTEAAMS  240
LDLPIIADNG FYGRGVGGNK GGGNFFLDEV AAWDSLHTPS CCM*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A5e-173590359ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1411ERKKVKKP
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.559721e-146seed coat
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.14G070000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003545264.10.0ethylene-responsive transcription factor ERF043
RefseqXP_028200063.10.0ethylene-responsive transcription factor ERF043-like
TrEMBLA0A445H2P60.0A0A445H2P6_GLYSO; Dehydration-responsive element-binding protein 2D
TrEMBLI1M8710.0I1M871_SOYBN; Uncharacterized protein
STRINGGLYMA14G07620.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF25623380
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.12e-41ERF family protein