PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.13G266600.1.p
Common NameGLYMA_13G266600, LOC100795898
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family BES1
Protein Properties Length: 335aa    MW: 35522.7 Da    PI: 8.9015
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.13G266600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822206.76.6e-6431462150
               DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssasasp 90 
                          +  r+ptwkErEnnkrRERrRRaiaaki++GLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+ e+++++g sa asp
  Glyma.13G266600.1.p   3 SVARQPTWKERENNKRRERRRRAIAAKIFSGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEADGTTYRKGCKPPvERMDIVGGSAAASP 92 
                          5689************************************************************************************** PP

               DUF822  91 esslqsslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150
                          +ss++        +sp++sy++sp ss  psp  + + ++ +a  +sl+p+l++ls+ sss+
  Glyma.13G266600.1.p  93 CSSYH--------PSPCASYNPSPGSSCLPSPRASPFPPNPNAdgNSLIPWLKNLSSGSSSA 146
                          *****........9*****************98877666555455**********9966654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.5E-635140IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MTSVARQPTW KERENNKRRE RRRRAIAAKI FSGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WTVEADGTTY RKGCKPPVER MDIVGGSAAA SPCSSYHPSP CASYNPSPGS SCLPSPRASP  120
FPPNPNADGN SLIPWLKNLS SGSSSASSSK LPQLYIPNGS ISAPVTPPIS SPSSRKPQIR  180
ADWEDQSNCP TAWGGPAYTF VPSSTPPSPG RQVAETDWFS KIRIPQGGLA PTSPTFSLVS  240
SNPFGLKEDA MVGSGSRMWT TPGASGTCSP AVAAGSENTS DIPMAEAVSD EFAFGSSSSG  300
LVNAWKGERI HEASFGTDDL ELTLGSSKTR LLHK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-23676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-23676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-23676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-23676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.260670.0cotyledon| flower| hypocotyl| leaf| meristem| root
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.13G266600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003543196.10.0BES1/BZR1 homolog protein 4 isoform X1
RefseqXP_028190417.10.0BES1/BZR1 homolog protein 4-like isoform X1
SwissprotQ9ZV881e-122BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A445IB090.0A0A445IB09_GLYSO; BES1/BZR1-like protein 4 isoform B
TrEMBLI1M2X80.0I1M2X8_SOYBN; Uncharacterized protein
STRINGGLYMA13G34180.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26613375
Representative plantOGRP15951542
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-120BES1/BZR1 homolog 4