PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.12G231400.2.p
Common NameGLYMA_12G231400
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family BES1
Protein Properties Length: 279aa    MW: 29080.4 Da    PI: 6.505
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.12G231400.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF82232.23.6e-10169071150
               DUF822  71 kgskpl.eeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssld..sislasaasllpvlsvlslvsssl 150
                          +g+kp+ e+++++g sa asp+ss++        +sp++sy++sp ss  psp  +    +++a+ +sl+p+l++ls+ sss+
  Glyma.12G231400.2.p  16 RGCKPPvERMDIVGGSAAASPCSSYH--------PSPCASYNPSPGSSCLPSPRASPypPNHNADGNSLIPWLKNLSSGSSSA 90 
                          69************************........******************97665005555556**********9966654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.8E-101684IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MTEAFADIAV YSLIWRGCKP PVERMDIVGG SAAASPCSSY HPSPCASYNP SPGSSCLPSP  60
RASPYPPNHN ADGNSLIPWL KNLSSGSSSA SSSKLPQLYI PNGSISAPVT PPISSPSSRK  120
PRINADWEDL STRPAAWGGP AYTFLPSSTP PSPGRQVAET DWFSKIRIPQ VGLTPTSPTF  180
SLVSSNPFGF KEDAMGGSGS RMWTTPGASG TCSPAVAAGS ENTSDIPMAE AVSDEFAFGS  240
SSSVLVNAWK GERIHEASFG TDDLELTLGS SKTRLLHK*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.260670.0cotyledon| flower| hypocotyl| leaf| meristem| root
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.12G231400.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006592940.10.0BES1/BZR1 homolog protein 4 isoform X3
SwissprotQ9ZV883e-87BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A0R0H9620.0A0A0R0H962_SOYBN; Uncharacterized protein
STRINGGLYMA12G36050.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-79BES1/BZR1 homolog 4