PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.12G231400.1.p
Common NameGLYMA_12G231400, LOC100813985
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family BES1
Protein Properties Length: 335aa    MW: 35637.8 Da    PI: 9.2146
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.12G231400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822208.61.7e-6421461150
               DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssasas 89 
                          +++ r+ptwkErEnnkrRERrRRaiaaki++GLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+ e+++++g sa as
  Glyma.12G231400.1.p   2 TSGARQPTWKERENNKRRERRRRAIAAKIFSGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEADGTTYRKGCKPPvERMDIVGGSAAAS 91 
                          5789************************************************************************************** PP

               DUF822  90 pesslqsslkssalaspvesysaspksssfpspssld..sislasaasllpvlsvlslvsssl 150
                          p+ss++        +sp++sy++sp ss  psp  +    +++a+ +sl+p+l++ls+ sss+
  Glyma.12G231400.1.p  92 PCSSYH--------PSPCASYNPSPGSSCLPSPRASPypPNHNADGNSLIPWLKNLSSGSSSA 146
                          ******........******************97665005555556**********9966654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056873.9E-644140IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MTSGARQPTW KERENNKRRE RRRRAIAAKI FSGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WTVEADGTTY RKGCKPPVER MDIVGGSAAA SPCSSYHPSP CASYNPSPGS SCLPSPRASP  120
YPPNHNADGN SLIPWLKNLS SGSSSASSSK LPQLYIPNGS ISAPVTPPIS SPSSRKPRIN  180
ADWEDLSTRP AAWGGPAYTF LPSSTPPSPG RQVAETDWFS KIRIPQVGLT PTSPTFSLVS  240
SNPFGFKEDA MGGSGSRMWT TPGASGTCSP AVAAGSENTS DIPMAEAVSD EFAFGSSSSV  300
LVNAWKGERI HEASFGTDDL ELTLGSSKTR LLHK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-23676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-23676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-23676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-23676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.260670.0cotyledon| flower| hypocotyl| leaf| meristem| root
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.12G231400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006592939.10.0BES1/BZR1 homolog protein 4 isoform X1
RefseqXP_028193747.10.0BES1/BZR1 homolog protein 4-like isoform X1
SwissprotQ9ZV881e-125BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A445HUB70.0A0A445HUB7_GLYSO; BES1/BZR1-like protein 4
TrEMBLI1LV840.0I1LV84_SOYBN; Uncharacterized protein
STRINGGLYMA12G36050.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26613375
Representative plantOGRP15951542
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-116BES1/BZR1 homolog 4