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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Glyma.12G197300.1.p |
| Common Name | GLYMA_12G197300, LOC100805056 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
GRAS |
| Protein Properties |
Length: 461aa MW: 51464.9 Da PI: 6.5628 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.12G197300.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 295 | 1.9e-90 | 51 | 444 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl..fsevsP 89
++lLl+cA a++s+d +laq++++ l++ asp gd++qRl++ f++AL +r +r +++ ++ +++ + + +++++l ++++ P
Glyma.12G197300.1.p 51 EKLLLHCASALESNDVTLAQQVMWVLNNVASPVGDTNQRLTSWFLRALISRASRICPTAMSFKGSNTI----QRRLMSVTELagYVDLIP 136
689***************************************************77766643322222....333334444466****** PP
GRAS 90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpf 176
+++f++ + N+ I++a+ g +rvHi+Df+i++++QWp++++aLa+RpegppslRiT+ + ++ + +++e+g rL +fA+ +vpf
Glyma.12G197300.1.p 137 WHRFGYCASNNEIYKAITGFQRVHIVDFSITHCMQWPTFIDALAKRPEGPPSLRITVPSCRPHVpplVNISIHEVGLRLGNFAKFRDVPF 226
********************************************************9888555588999********************* PP
GRAS 177 efnvl...................vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsles....erdevLklvkslsPkvvvvve 243
efnv+ + l+ l++ +L+++++Eal++n++ l +l d++ ++ rd++L+++k+l+P++v +v+
Glyma.12G197300.1.p 227 EFNVIgntgplttaelsdestnfhFEAMLSLLNPTMLNLREDEALVINCQNWLRYLSDDRKGISRqslsLRDAFLNIIKGLNPRIVLLVD 316
***************99999988555688999*************************99877766556689******************* PP
GRAS 244 qeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplseka 333
+++d++++s+ r++ ++++++ fd+le+ lp++s +r+ E +g++i+n+++ eg +r+er e+ + ++r++++G+ +vp+ +++
Glyma.12G197300.1.p 317 EDCDLSASSLTSRITTCFNHMWIPFDALETFLPKDSCQRSEFESD-IGQKIENIISYEGHQRIERSESGVQMSQRMKNVGYLSVPFCDET 405
*********************************************.******************************************** PP
GRAS 334 akqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
+ ++k ll +++ g+ ++ e+g lvl+Wk+++ v+++aW
Glyma.12G197300.1.p 406 VREIKGLLDEHA-SGWGMKREEGMLVLTWKGNSCVFATAW 444
************.8899*********************** PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 461 aa
Download sequence Send
to blast |
MHVTSSQSHM KAELKGTTSI SFQNPTTTLF NNPLSGALKG CLGSLDGACI EKLLLHCASA 60
LESNDVTLAQ QVMWVLNNVA SPVGDTNQRL TSWFLRALIS RASRICPTAM SFKGSNTIQR 120
RLMSVTELAG YVDLIPWHRF GYCASNNEIY KAITGFQRVH IVDFSITHCM QWPTFIDALA 180
KRPEGPPSLR ITVPSCRPHV PPLVNISIHE VGLRLGNFAK FRDVPFEFNV IGNTGPLTTA 240
ELSDESTNFH FEAMLSLLNP TMLNLREDEA LVINCQNWLR YLSDDRKGIS RQSLSLRDAF 300
LNIIKGLNPR IVLLVDEDCD LSASSLTSRI TTCFNHMWIP FDALETFLPK DSCQRSEFES 360
DIGQKIENII SYEGHQRIER SESGVQMSQR MKNVGYLSVP FCDETVREIK GLLDEHASGW 420
GMKREEGMLV LTWKGNSCVF ATAWVPCEMR DHIGIDAGLS *
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| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015040 | 0.0 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |
