PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.12G120100.1.p
Common NameGLYMA_12G120100, LOC100808629
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family VOZ
Protein Properties Length: 480aa    MW: 53846.2 Da    PI: 5.0956
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.12G120100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ434.41.5e-1332354511217
                  VOZ   1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspw 90 
                          pppsafl+pkcalwdc+rpaqg+ew+q+ycss+h+ la neglpg+tp+lrp+gi++kdg+lf+a+ ak+qgkevgip+cegaa++kspw
  Glyma.12G120100.1.p 235 PPPSAFLAPKCALWDCFRPAQGVEWCQNYCSSCHELLANNEGLPGMTPILRPGGIGVKDGPLFDAVLAKTQGKEVGIPSCEGAASTKSPW 324
                          89**************************************************************************************** PP

                  VOZ  91 naaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldal 180
                          na+e+fdls+leget+rewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmke+gg+krsyymdpqp+s++ewhlyeyein++d +
  Glyma.12G120100.1.p 325 NAPEFFDLSFLEGETVREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEHGGQKRSYYMDPQPLSYLEWHLYEYEINNQDGC 414
                          ****************************************************************************************** PP

                  VOZ 181 alyrlelklvdekksakgkvskdsladlqkklgrlta 217
                          alyrlelklvd+kks+kgkv+k+sl+dlq+k+g+lta
  Glyma.12G120100.1.p 415 ALYRLELKLVDKKKSPKGKVTKESLTDLQNKMGQLTA 451
                          ***********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    Send to blast
MMRESSKGVG GSSSLQSMKE KEKHLVEKIQ GIFNSLQCAR KEGRGNDMVI FEEQMHQLLR  60
EWKAELESPA NSLADGSFGS FPSELAQMLL GSEDKDDATS PLTKPVPLKN EIHTNNISDG  120
NFQFFQEKHF DDNQPLGHTF EGSASTLYNN AFNSSDMTQL DYHPFSLNQD MDHKPEGLIG  180
QLDLYQDLRH NTEMKNSEST QFSLEGFDCS QFFEADDNVQ HGENIIPNIL PNICPPPSAF  240
LAPKCALWDC FRPAQGVEWC QNYCSSCHEL LANNEGLPGM TPILRPGGIG VKDGPLFDAV  300
LAKTQGKEVG IPSCEGAAST KSPWNAPEFF DLSFLEGETV REWLFFDKPR RAFESGNRKQ  360
RSLPDYSGRG WHESRKQVMK EHGGQKRSYY MDPQPLSYLE WHLYEYEINN QDGCALYRLE  420
LKLVDKKKSP KGKVTKESLT DLQNKMGQLT AAVPSTDDGY GQPVKGKTKT KSENDESPK*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.92780.0epicotyl| flower| somatic embryo
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Ubiquitous. Expressed in the vascular bundles of various tissues, specifically in the phloem. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.12G120100.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150390.0AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003540951.10.0transcription factor VOZ1
RefseqXP_006592446.10.0transcription factor VOZ1
RefseqXP_014620351.10.0transcription factor VOZ1
RefseqXP_014620352.10.0transcription factor VOZ1
RefseqXP_028195233.10.0transcription factor VOZ1-like
RefseqXP_028195234.10.0transcription factor VOZ1-like
RefseqXP_028195235.10.0transcription factor VOZ1-like
RefseqXP_028195236.10.0transcription factor VOZ1-like
SwissprotQ9SGQ01e-150VOZ1_ARATH; Transcription factor VOZ1
TrEMBLA0A0B2S4H90.0A0A0B2S4H9_GLYSO; Transcription factor VOZ1 isoform A
TrEMBLK7LUC50.0K7LUC5_SOYBN; Uncharacterized protein
STRINGGLYMA12G14030.30.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14983494
Representative plantOGRP23271335
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.21e-143vascular plant one zinc finger protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Yasui Y,Kohchi T
    VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
    Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
    [PMID:25351333]
  3. Kumar S,Choudhary P,Gupta M,Nath U
    VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
    Plant Physiol., 2018. 176(4): p. 2917-2930
    [PMID:29507119]
  4. Song C,Lee J,Kim T,Hong JC,Lim CO
    VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
    Planta, 2018. 247(6): p. 1439-1448
    [PMID:29536220]