PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Glyma.10G111400.1.p | ||||||||
Common Name | GLYMA_10G111400, LOC100816239 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 306aa MW: 33394.3 Da PI: 9.4514 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 59.8 | 5.1e-19 | 3 | 46 | 16 | 58 |
TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 16 kgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 kg+++pr+YYrCt + +Cpv+k+v+r+aed +++++tYeg+Hn Glyma.10G111400.1.p 3 KGNPCPRAYYRCTASpSCPVRKQVQRCAEDMSILITTYEGTHNN 46 89***********999**************************96 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 20.438 | 1 | 49 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.7E-15 | 3 | 49 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.5E-14 | 3 | 48 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.7E-15 | 3 | 45 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 3.9E-18 | 3 | 49 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 306 aa Download sequence Send to blast |
MGKGNPCPRA YYRCTASPSC PVRKQVQRCA EDMSILITTY EGTHNNPLPM SATAMACKTF 60 ATASMLQSPS LSSQHGLVDS AISSIINSSA PYYNPNNALN FSTHQVSRRQ QFYFPNSSIS 120 TLNSHPTITL DLTTPPTSSS NSSFTCMPKY SSTNLNFSSG FSPLHSSMPQ SPWNRYSGYS 180 NSGTLYQNRH QGGNYMLNTG NQNQPHSVGH LHQPIYMSNN STISQHSFPN PIVAATEAII 240 RSNPKFQSAL AIALTTYVGN EASSGRTREN HVLESAELMK LKLLRSENSI GNSSIFPLPL 300 PEQRK* |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Glyma.10G111400.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_006589957.1 | 0.0 | probable WRKY transcription factor 61 | ||||
TrEMBL | A0A0R0HRY8 | 0.0 | A0A0R0HRY8_SOYBN; Uncharacterized protein | ||||
TrEMBL | A0A445IL09 | 0.0 | A0A445IL09_GLYSO; Glutamate receptor 3.4 | ||||
STRING | GLYMA10G14610.2 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF650 | 34 | 134 | Representative plant | OGRP14 | 17 | 875 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G04450.1 | 9e-30 | WRKY family protein |
Link Out ? help Back to Top | |
---|---|
Phytozome | Glyma.10G111400.1.p |
Entrez Gene | 100816239 |