PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.10G067000.1.p
Common NameGLYMA_10G067000, LOC100813230
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 186aa    MW: 20804.3 Da    PI: 8.0854
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.10G067000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.83.5e-151767155
                  AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         + ykGVr++  +g+Wv+e+r p  n+k++r++lg+f  +++Aa a++ a+++++g
  Glyma.10G067000.1.p 17 PVYKGVRQR--NGKWVSELRQP--NNKNARVWLGTFPHPDMAAIAYDVAALAFKG 67
                         68****975..6******9998..4478**********************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008477.4E-101767IPR001471AP2/ERF domain
PROSITE profilePS5103219.5991875IPR001471AP2/ERF domain
SuperFamilySSF541712.09E-171876IPR016177DNA-binding domain
SMARTSM003803.0E-261881IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.4E-261876IPR001471AP2/ERF domain
PRINTSPR003671.4E-61930IPR001471AP2/ERF domain
CDDcd000185.82E-241977No hitNo description
PRINTSPR003671.4E-65777IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
MQKRRAGRKK FHETRHPVYK GVRQRNGKWV SELRQPNNKN ARVWLGTFPH PDMAAIAYDV  60
AALAFKGDSA SLNFPNAATS FPRLNSRTCS VRAIQFAATQ AAEKHFSCVE SQQLQREGSG  120
SGSFSLDDDS SEFSSQGRFF WDEEEVFNMP ELLNCMAEAL IITPPALERG FNWVGGETTV  180
DLTLW*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.10G067000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003537045.11e-138dehydration-responsive element-binding protein 1B
RefseqXP_028184000.11e-138dehydration-responsive element-binding protein 1B-like
TrEMBLA0A445IJ361e-136A0A445IJ36_GLYSO; Dehydration-responsive element-binding protein 1F
TrEMBLK7LHT21e-136K7LHT2_SOYBN; Uncharacterized protein
STRINGGLYMA10G07756.11e-137(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24333224
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25490.16e-41C-repeat/DRE binding factor 1