PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.10G066800.3.p
Common NameGLYMA_10G066800, LOC100799670
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family Trihelix
Protein Properties Length: 595aa    MW: 68744.1 Da    PI: 6.3715
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.10G066800.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix926.1e-29128213187
             trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                          rW++qe+l+L+e+r++++ ++++++ k+plW+evs+ m +e+g++rs k+C+ek+enl k+ykk+keg+ +r+  + +++++f+qlea
  Glyma.10G066800.3.p 128 RWPRQETLTLLEIRSRLDPKFKEANHKGPLWDEVSRIMcEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRH--DGKHYRFFRQLEA 213
                          8***********************************998*******************************985..5557*******85 PP
2trihelix446e-14431509283
             trihelix   2 WtkqevlaLiearremeerlrrgk.lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfd 83 
                          W+++e+  L ++r eme+r+  ++ +++  W+ v+ km++ g+ers+ +Ckekwe++nk+ k+ k+++++     s++c yf+
  Glyma.10G066800.3.p 431 WQESEITRLEQLRAEMETRFPYSEiSEEVSWDVVATKMADFGYERSALMCKEKWESINKEEKNSKNRKENL----SRNCFYFK 509
                          *********************876599********************************988888888775....78999997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007170.13125188IPR001005SANT/Myb domain
PROSITE profilePS500906.98127186IPR017877Myb-like domain
PfamPF138378.2E-20128214No hitNo description
CDDcd122032.86E-20128193No hitNo description
SMARTSM007170.0056427490IPR001005SANT/Myb domain
PfamPF138374.1E-10429512No hitNo description
PROSITE profilePS500906.272430488IPR017877Myb-like domain
CDDcd122032.36E-15431495No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 595 aa     Download sequence    Send to blast
MEMEDHQHQH HHHHFGMNDL RQVVNNGPRP AHTTFPSMPP HPTEELFPGH HHRNLTPLPT  60
HHPQQQQHFE VMMFGRDIMP PGLHDFASTP HDSAVATTTI TLPTPPVTCG FDAAEGAGCI  120
GGDPFTGRWP RQETLTLLEI RSRLDPKFKE ANHKGPLWDE VSRIMCEEHG YQRSGKKCRE  180
KFENLYKYYK KTKEGKAGRH DGKHYRFFRQ LEALYGENSN TVSVPETNVV VGSIHFQGPS  240
QTNQDNNKFQ SHNNNNNRHC DSLSLTNSTN FDTSTSEGHD GNDHSMENES MEKRIKRKSG  300
RSWKVKIKDF IDSQMRKLVE KQKEWLDKLV KTLEEKEKER MLREEEWRKQ EANRLEREQK  360
FWAKERAWIE ARDAALMEAL HKLTGREIMK VETDPEGTIN VMTAAEVQNQ NNEDESEILN  420
SSNVIRGADS WQESEITRLE QLRAEMETRF PYSEISEEVS WDVVATKMAD FGYERSALMC  480
KEKWESINKE EKNSKNRKEN LSRNCFYFKN NHEDQQQSSL YDQGSAYCDD DVNEQGKEIE  540
RLQTNNGSSS PSKSNIVGNV VPSDSCFPFL MGADQGGNLW ENYGLKLNKE NQNH*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.10G066800.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006588827.10.0trihelix transcription factor PTL
RefseqXP_028183618.10.0trihelix transcription factor PTL-like
TrEMBLA0A445IIV00.0A0A445IIV0_GLYSO; Trihelix transcription factor PTL isoform A
TrEMBLI1L9840.0I1L984_SOYBN; Uncharacterized protein
STRINGGLYMA10G07730.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03680.11e-110Trihelix family protein