PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Glyma.09G149700.1.p

Common Name

GLYMA_09G149700, LOC100800179

Organism

Glycine max

Taxonomic ID

3847

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

Trihelix

Protein Properties

Length: 1012aa MW: 113482 Da PI: 7.9621

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Glyma.09G149700.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	29.9	1.5e-09	237	292	21	76
trihelix 21 lrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 + rgk ++ + +ev+++++++g++r +k+ kw+n+ ++++k+ e+e++++ e+ Glyma.09G149700.1.p 237 ITRGKTRADKDKEVAEFLKRHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGEREQI 292 45789999999**************************************9965544 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF56112	3.12E-17	857	989	IPR011009	Protein kinase-like domain
Gene3D	G3DSA:1.10.510.10	1.1E-10	861	992	No hit	No description
CDD	cd00180	1.39E-12	862	989	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 1012 aa Download sequence Send to blast
MGDKGGTTKK QQLQQPQPKQ PQSHHHHQQQ QQQAQQISSS PKASHEEPIT EVIRPIHHHH 60 QQQLSPVVVA TGAPPFIPSP LYVSSGASCS PFEPQFETLN PKRPRYSGQW KQLLPSPPAQ 120 QQQSQMAMFP TSESSPSPTT HTSSNPLQQQ PQTQTASSSD TSSSPTHSLP LLSGEGTNQE 180 GEQVHQQLRK GKYVSPVWKP NEMLWLARAW KEQYQGGGGG SDSSSRAEQQ QQAELGITRG 240 KTRADKDKEV AEFLKRHGVN RDAKTAGTKW DNMLGEFRKV YEWERGGERE QIGKSYFRLS 300 PYERKLHRLP ASFDEDVFDE LAQFMGSRMR SSHGRAVSTF VSRDEARTAL ASTRALPPPP 360 RPFKDDETPL SARTKQLTLA SGGEPFFHGS RGGLLGLDSL LDVSGSSSSS KELRRIGKIR 420 MTWEESVTLW AEEGEVHRGR VKLQSSSLLN ADELTCFDDA MVPCPMEYFE DGPLKGFSVD 480 RFVSGQQVKV FGRRKSSPAS DSSSSAGFAE RVQLPSKALP IRCIGTLNFR DPTDYYMECL 540 LRASPQTLPS LLELKRHLKE PPPEDLRFPL RRDMYEDLPQ GKELFFTTTP EPLDCRNIMY 600 DVVGPIIRPT TISLATSSSR DSFIPLWDDC INRIIQKFCP EQLTLIRKPT SPPPQSESES 660 TNNSQLQDQW PNVTGFVNNY CLWRGEETHQ LKDSQPNPST TLVAKLLWTY MDIPYILGYY 720 AVANTVTFCA MSRSQDGIIN RTDLLDLNLS TPTERLKVLV PCFRIALLLP LLSKRCMSNI 780 SNCKGFTYSD FERVCYGNGV VTEVTPNTCT RVFSEKRKWM AVKEVYEILD HRIPHAEVLV 840 GVSERELGLS FKPRGCRVRP GNWEELVEAL KYVTKALVAL HDLSFMHRDL KWEKVMRRMD 900 REEEWFVCGF DEAAGAPELK GWRVVGAREG HAPEMERGLH GVKVDVWGVG NLIRTCGLGG 960 VPKMLRELQS RCMEQNPEQR PTAADCYHHL LQLQSSLSAA AAAAAGGVTV L*

Sequence ? help Back to Top

Protein Sequence Length: 1012 aa Download sequence Send to blast

MGDKGGTTKK QQLQQPQPKQ PQSHHHHQQQ QQQAQQISSS PKASHEEPIT EVIRPIHHHH  60
QQQLSPVVVA TGAPPFIPSP LYVSSGASCS PFEPQFETLN PKRPRYSGQW KQLLPSPPAQ  120
QQQSQMAMFP TSESSPSPTT HTSSNPLQQQ PQTQTASSSD TSSSPTHSLP LLSGEGTNQE  180
GEQVHQQLRK GKYVSPVWKP NEMLWLARAW KEQYQGGGGG SDSSSRAEQQ QQAELGITRG  240
KTRADKDKEV AEFLKRHGVN RDAKTAGTKW DNMLGEFRKV YEWERGGERE QIGKSYFRLS  300
PYERKLHRLP ASFDEDVFDE LAQFMGSRMR SSHGRAVSTF VSRDEARTAL ASTRALPPPP  360
RPFKDDETPL SARTKQLTLA SGGEPFFHGS RGGLLGLDSL LDVSGSSSSS KELRRIGKIR  420
MTWEESVTLW AEEGEVHRGR VKLQSSSLLN ADELTCFDDA MVPCPMEYFE DGPLKGFSVD  480
RFVSGQQVKV FGRRKSSPAS DSSSSAGFAE RVQLPSKALP IRCIGTLNFR DPTDYYMECL  540
LRASPQTLPS LLELKRHLKE PPPEDLRFPL RRDMYEDLPQ GKELFFTTTP EPLDCRNIMY  600
DVVGPIIRPT TISLATSSSR DSFIPLWDDC INRIIQKFCP EQLTLIRKPT SPPPQSESES  660
TNNSQLQDQW PNVTGFVNNY CLWRGEETHQ LKDSQPNPST TLVAKLLWTY MDIPYILGYY  720
AVANTVTFCA MSRSQDGIIN RTDLLDLNLS TPTERLKVLV PCFRIALLLP LLSKRCMSNI  780
SNCKGFTYSD FERVCYGNGV VTEVTPNTCT RVFSEKRKWM AVKEVYEILD HRIPHAEVLV  840
GVSERELGLS FKPRGCRVRP GNWEELVEAL KYVTKALVAL HDLSFMHRDL KWEKVMRRMD  900
REEEWFVCGF DEAAGAPELK GWRVVGAREG HAPEMERGLH GVKVDVWGVG NLIRTCGLGG  960
VPKMLRELQS RCMEQNPEQR PTAADCYHHL LQLQSSLSAA AAAAAGGVTV L*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Glyma.09G149700.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_003533242.1	0.0	uncharacterized protein LOC100800179
TrEMBL	K7LE15	0.0	K7LE15_SOYBN; Uncharacterized protein
STRING	GLYMA09G27590.2	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF11857	28	31
Representative plant	OGRP9479	6	7

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	4e-08	Trihelix family protein

Link Out ? help Back to Top
Phytozome	Glyma.09G149700.1.p
Entrez Gene	100800179