PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.09G129100.1.p
Common NameGLYMA_09G129100, LOC100788213
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 373aa    MW: 40953.2 Da    PI: 6.502
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.09G129100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.85.2e-29204262259
                          --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                          +D ++WrKYGqK++kgs++pr+YYrC+s  gC ++k+vers+++p+++++tY+g+H+h 
  Glyma.09G129100.1.p 204 SDLWAWRKYGQKPIKGSPYPRNYYRCSSCkGCAARKQVERSTSEPNTFIVTYTGDHKHA 262
                          799***********************9988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.5E-29189264IPR003657WRKY domain
SuperFamilySSF1182904.71E-25197264IPR003657WRKY domain
PROSITE profilePS5081131.663198264IPR003657WRKY domain
SMARTSM007742.5E-33203263IPR003657WRKY domain
PfamPF031067.3E-24205261IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    Send to blast
MTHEDWDLFA IVRSCKAATF TATTNTETPP TTTTTTTSNT TSCSGLSQEN GSFSFPNLVQ  60
PTTNGFQELQ HQQLLINFNP TNTITSTSTS TSGLGINPNS TFSEVAGFIG QQQIQQSLHH  120
HLVPAPTNHT FIGTPSTTGF DRFQQQQLQT PEQQQPQQNQ PPLQAPQTSH ILSPTTQPQT  180
PRSRKRKSQQ KKMVCHVTAQ NLSSDLWAWR KYGQKPIKGS PYPRNYYRCS SCKGCAARKQ  240
VERSTSEPNT FIVTYTGDHK HAKPVHRNSL AGNTRTKLST TRLPETHETV SCVIIENACS  300
SNSELSPMSV RSDTLENEAT LVPGEPDCPD TDIDPEVPSE EDEDVLIPNT GAMSDSIFLG  360
LTNFDRDGVS TL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-16192264274WRKY transcription factor 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1182187SRKRKS
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.09G129100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003533143.10.0probable WRKY transcription factor 27
TrEMBLK7LDJ80.0K7LDJ8_SOYBN; Uncharacterized protein
STRINGGLYMA09G24080.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67943249
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.12e-45WRKY DNA-binding protein 27