PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.09G127100.1.p
Common NameGLYMA_09G127100
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 243aa    MW: 26762.7 Da    PI: 9.208
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.09G127100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY521.4e-16155191237
                          --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEE CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkk 37 
                          +Dg++WrKYGqK+ kg+++p++YYrC +a gCp +k+
  Glyma.09G127100.1.p 155 SDGCQWRKYGQKMAKGNPCPQAYYRCIMAvGCPFRKQ 191
                          7***************************99*****97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182901.31E-14153191IPR003657WRKY domain
SMARTSM007741.4E-9154216IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.3E-15154191IPR003657WRKY domain
PROSITE profilePS5081117.075154191IPR003657WRKY domain
PfamPF031065.1E-15156196IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MNAENKKLKE MLSHVTGNYT VLQMHLVTLM QQNQQRTETM ENGGKVEDKN HGVGGGKVPR  60
KFLDIGPSDR AKVDDQVFDS SFDERTRSSM PQNNNVKLEQ EMEQEITMVI KASSLQKVNP  120
SNPMDQSTAE ATMRKAPTLS NSQNELSNLL LLQISDGCQW RKYGQKMAKG NPCPQAYYRC  180
IMAVGCPFRK QKLIVQLPGA SSSSFLSKAT LGGEAPSSLT YSLVVGASPL LFSFAFRCIS  240
MV*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.282831e-129cotyledon| flower| hypocotyl| leaf| meristem| root| stem
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.09G127100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU0195651e-127EU019565.1 Glycine max WRKY23 (WRKY23) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001348208.11e-81WRKY transcription factor 23
RefseqXP_028180922.11e-81probable WRKY transcription factor 31
TrEMBLA0A0R0I7N30.0A0A0R0I7N3_SOYBN; Uncharacterized protein
TrEMBLA0A445J0B30.0A0A445J0B3_GLYSO; WRKY transcription factor 6
STRINGGLYMA09G00820.14e-81(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-42WRKY family protein