PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Glyma.08G149200.2.p | ||||||||
Common Name | GLYMA_08G149200 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | ERF | ||||||||
Protein Properties | Length: 321aa MW: 35603.2 Da PI: 4.3724 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51 | 3.7e-16 | 82 | 130 | 2 | 54 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 +y+GVr++k +g+W+AeI+ + + +r+++g+f taeeA +a++a r+++e Glyma.08G149200.2.p 82 KYRGVRQRK-WGKWAAEIYNpF-----QsTRIWIGTFSTAEEASQAYEARRLEFE 130 8*******9.********9955.....35*******************9999876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 1.4E-19 | 81 | 130 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 18.9 | 82 | 139 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 2.82E-21 | 82 | 129 | No hit | No description |
SMART | SM00380 | 3.7E-13 | 82 | 136 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.38E-15 | 82 | 129 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 1.1E-11 | 82 | 131 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.9E-10 | 83 | 94 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.9E-10 | 105 | 121 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 321 aa Download sequence Send to blast |
MQEPKAMRKL HIICNDPDAT DSSEDELERI QNPRRVKRSA CEIPLPHTFT TPEMRVSTKD 60 QPQSKKRALT HTPSARRNTS RKYRGVRQRK WGKWAAEIYN PFQSTRIWIG TFSTAEEASQ 120 AYEARRLEFE AMAKAQAYKT GSRSAAEPLA TTSEKSNCRN SSSAAAAVDV SVSEKVSTTS 180 DDSDKSVLSH NSPLSVLELD TPASKFIEMG NVSTDEAIEA NNLVDELAEL EIPDLNLLNL 240 PPPPSAAVPS EIEPNFGLDF DWLSFDDYGQ GFDDFGGLED IHICGFDDNE PSELPDFDFG 300 DFGADEFSGW TEDPLNIHYA * |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00217 | DAP | Transfer from AT1G68550 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Glyma.08G149200.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028242648.1 | 0.0 | ethylene-responsive transcription factor ERF118-like | ||||
TrEMBL | A0A0R0IM74 | 0.0 | A0A0R0IM74_SOYBN; Uncharacterized protein | ||||
TrEMBL | A0A445JEU3 | 0.0 | A0A445JEU3_GLYSO; Ethylene-responsive transcription factor ERF118 | ||||
STRING | GLYMA08G15830.2 | 0.0 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.2 | 2e-29 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Glyma.08G149200.2.p |