PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.08G126500.1.p
Common NameGLYMA_08G126500, LOC100101887
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 377aa    MW: 42250.8 Da    PI: 7.771
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.08G126500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.46.1e-082442821755
                          HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                          A+rsR RK+++i+eLe+ v++L+ae ++   ele l+++
  Glyma.08G126500.1.p 244 AQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQ 282
                          89*****************************99999886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.2E-4233292IPR004827Basic-leucine zipper domain
CDDcd147033.45E-16235283No hitNo description
SuperFamilySSF579597.74E-6244286No hitNo description
Gene3DG3DSA:1.20.5.1701.1E-5244286No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
MANSKGSSSF RNFMYPGKHP LLPPKSPFPS VSQAYADYVP NPAVGLKAGN RPRDGNTHHQ  60
RTSSESLVIE EQPSWLDDLL NEPETPVRRG GHRRSSSDSF AYIDTVNASN LNYASQDEYK  120
YKNMMSIPPW SPQDFDCSKD ARHVPVYAEM NSTKQKNRSW DSFSNAMTNP VGVPSGKDSA  180
AFQSSGLQCT PHEADALPPA ASEKHDSVEL GLQDAKSFPE KKDISHAKSS ASETDTKRAK  240
QQFAQRSRVR KLQYIAELER NVQALQAEGS EVSAELEFLN QQNLILSMEN KALKQRLENI  300
AQEQLIKYLE QEVLEREIGR LRALYQQQQQ PPQTQPQQQP SGSHRRSNSR ELESQFANLS  360
LKHKDTNSGQ DPALRI*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.369130.0leaf
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.08G126500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2353040.0AC235304.1 Glycine max strain Williams 82 clone GM_WBb0065N07, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001345651.10.0bZIP transcription factor 63
RefseqXP_028243656.10.0uncharacterized protein At4g06598-like
SwissprotQ8W3M73e-67Y4598_ARATH; Uncharacterized protein At4g06598
TrEMBLA0A445JDT60.0A0A445JDT6_GLYSO; Uncharacterized protein
TrEMBLI1KSQ60.0I1KSQ6_SOYBN; Uncharacterized protein
STRINGGLYMA08G13330.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51232637
Representative plantOGRP42521219
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.21e-111bZIP family protein
Publications ? help Back to Top
  1. Kumekawa N,Hosouchi T,Tsuruoka H,Kotani H
    The size and sequence organization of the centromeric region of Arabidopsis thaliana chromosome 4.
    DNA Res., 2001. 8(6): p. 285-90
    [PMID:11853315]
  2. Liao Y, et al.
    Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis.
    Planta, 2008. 228(2): p. 225-40
    [PMID:18365246]