PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Glyma.08G077400.1.p | ||||||||
Common Name | bZIP10, GLYMA_08G077400 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bZIP | ||||||||
Protein Properties | Length: 240aa MW: 26187.5 Da PI: 8.4718 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 45.1 | 2.1e-14 | 155 | 208 | 2 | 55 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 + l+++rr++kNRe+A rsR+RK+a++ eLe v +Le+eN +L +e e++ + Glyma.08G077400.1.p 155 ATLQKQRRMIKNRESAARSRERKQAYTSELEYLVHQLEQENVQLLNEEAEMRRQ 208 5799**************************************998665555444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.0E-13 | 154 | 218 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.0E-13 | 155 | 210 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.105 | 156 | 208 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 4.43E-17 | 158 | 219 | No hit | No description |
SuperFamily | SSF57959 | 1.5E-10 | 158 | 209 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-13 | 159 | 210 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 161 | 176 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence Send to blast |
MASSKVVSTN PDLPRNSSSS SSSSSTSPIS PLSSLLSDLH PMDDILKSIS PKSVDDVWND 60 IVTGATVHDA VSATTTDNAD AAMTLEDFLT KAIREEDVRG APPPPPPPPP SSFLPFPADG 120 SSSSVEPFAN GVSAAPSNSV QKGKRRAVEE PVDKATLQKQ RRMIKNRESA ARSRERKQAY 180 TSELEYLVHQ LEQENVQLLN EEAEMRRQRK KQLFECIIPI EVMPKPKKKL RRVNSAQSL* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 224 | 230 | KPKKKLR |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Gma.7043 | 0.0 | hypocotyl| root| seed coat| stem |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Glyma.08G077400.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015034 | 2e-40 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001234974.1 | 1e-173 | transcription factor bZIP10 | ||||
Refseq | XP_028243143.1 | 1e-173 | G-box-binding factor 4-like isoform X1 | ||||
TrEMBL | A0A445JBB8 | 1e-171 | A0A445JBB8_GLYSO; G-box-binding factor 4 isoform A | ||||
TrEMBL | A4ZGU1 | 1e-171 | A4ZGU1_SOYBN; Transcription factor bZIP10 | ||||
STRING | GLYMA08G08220.1 | 1e-172 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2028 | 34 | 81 | Representative plant | OGRP8662 | 7 | 15 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44080.1 | 6e-25 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Glyma.08G077400.1.p |
Entrez Gene | 100101890 |
Publications ? help Back to Top | |||
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