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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.07G266500.1.p |
| Common Name | GLYMA_07G266500, LOC100792931 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
GRAS |
| Protein Properties |
Length: 543aa MW: 60329.1 Da PI: 6.4623 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.07G266500.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 410.7 | 1.3e-125 | 174 | 542 | 4 | 374 |
GRAS 4 lLlecAeavssgdlelaqalLar.lselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92
+L cA+avs++d a+ + + l +++s +gdp+qRl ay++e+L+arl +s++ +yk+l++++ + s+e +++++++++++P+ k
Glyma.07G266500.1.p 174 VLRVCAQAVSDDDVPTARGWMDNvLGKMVSVSGDPIQRLGAYLLEGLRARLESSGNLIYKSLNCEQPT---SKELMSYMHILYQICPYWK 260
6788***************997627888***************************************9...99999************** PP
GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnv 180
f+++ aN I ea+++e+r+HiiDf+i qG+QW L+qaLa Rp+gppslR+Tgv++++s + l+ +gerL++fA+++gvpfef+
Glyma.07G266500.1.p 261 FAYISANAVIEEAMANESRIHIIDFQIAQGTQWHLLIQALAHRPGGPPSLRVTGVDDSQSIhaRGGGLQIVGERLSDFARSCGVPFEFRS 350
*********************************************************9988889999*********************** PP
GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfds 270
+a + ++ +++v pgEalaV++ + lh+++desvs+e++rd++L+lvk+lsPkvv++veqe+++n+++F++rf+e+l+yy+a+f+s
Glyma.07G266500.1.p 351 -AAISGCEVVRGNIEVLPGEALAVSFPYVLHHMPDESVSTENHRDRLLRLVKRLSPKVVTIVEQESNTNTSPFFHRFVETLDYYTAMFES 439
.56666677799****************************************************************************** PP
GRAS 271 leaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvl 360
+++ pr++++ri+ E+++++r+ivn++aceg er+erhe l+kWr+rl++aGFk+ +ls++++ ++ ll++++++ yr+e+++g+l+l
Glyma.07G266500.1.p 440 IDVACPRDDKKRISAEQHCVARDIVNMIACEGVERVERHELLGKWRSRLSMAGFKQCQLSSSVMVAIQNLLKEFSQN-YRLEHRDGALYL 528
***************************************************************************66.************ PP
GRAS 361 gWkdrpLvsvSaWr 374
gW++r + + SaWr
Glyma.07G266500.1.p 529 GWMNRHMATSSAWR 542
*************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 543 aa
Download sequence Send
to blast |
MQTSQKHPSS AGVHFYHQPV QGIYQMLQSN LCHDSSSQGT SVSFETCKEQ YFTLESCPAP 60
TTCFVDCDDS PSYASVSSKR TPFSPQGSQS CYSDHQQSSD NTYGSPISGL SSVDDGHELK 120
HKLRELEISL LGPEQSDSCG CCVVKGGLQG SSQLAKHNWD QIAENVAQFD LKGVLRVCAQ 180
AVSDDDVPTA RGWMDNVLGK MVSVSGDPIQ RLGAYLLEGL RARLESSGNL IYKSLNCEQP 240
TSKELMSYMH ILYQICPYWK FAYISANAVI EEAMANESRI HIIDFQIAQG TQWHLLIQAL 300
AHRPGGPPSL RVTGVDDSQS IHARGGGLQI VGERLSDFAR SCGVPFEFRS AAISGCEVVR 360
GNIEVLPGEA LAVSFPYVLH HMPDESVSTE NHRDRLLRLV KRLSPKVVTI VEQESNTNTS 420
PFFHRFVETL DYYTAMFESI DVACPRDDKK RISAEQHCVA RDIVNMIACE GVERVERHEL 480
LGKWRSRLSM AGFKQCQLSS SVMVAIQNLL KEFSQNYRLE HRDGALYLGW MNRHMATSSA 540
WR*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: During development, higher expression levels are detected in young rosette leaves, senescing leaves and petals and sepals at flower stage 15. {ECO:0000269|PubMed:16680434}. |
| Uniprot | TISSUE SPECIFICITY: Expressed in roots, hypocotyls, cotyledons, shoot apex, leaves, flowers and siliques. {ECO:0000269|PubMed:10341448, ECO:0000269|PubMed:16680434, ECO:0000269|PubMed:18500650}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that acts as a positive regulator of continuous red light signals downstream of phytochrome B (phyB). Required for the regulation of hypocotyl elongation during de-etiolation. May be required to modulate phytochrome A (phyA) signal transduction in a phyB-independent way. {ECO:0000269|PubMed:16680434}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By osmotic and cold stresses, and UV-A/B. {ECO:0000269|PubMed:16680434}. |
