PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Glyma.07G229800.1.p | ||||||||
Common Name | GLYMA_07G229800, LOC100776601 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | G2-like | ||||||||
Protein Properties | Length: 332aa MW: 37263.9 Da PI: 6.1382 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 99.7 | 2e-31 | 21 | 75 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLH+rF ea++qLGG+e+AtPk+++++m+++gLtl+h+kSHLQkYRl Glyma.07G229800.1.p 21 KPRLKWTPELHQRFTEAINQLGGAERATPKSLMRVMGIPGLTLYHLKSHLQKYRL 75 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.3E-29 | 19 | 76 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 4.48E-16 | 20 | 76 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 7.2E-22 | 21 | 76 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 8.4E-8 | 23 | 74 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 2.9E-22 | 119 | 164 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 332 aa Download sequence Send to blast |
MDLQNVQNHS MMRLVLSTDA KPRLKWTPEL HQRFTEAINQ LGGAERATPK SLMRVMGIPG 60 LTLYHLKSHL QKYRLGKSQP LETCSDNKQQ GYCEIQNSDG HFSKEISIGT QNQMTESLKI 120 AEALQMQMEV QRKLNEQIEV QKHLQRRIEA QGKYLQSVLT KAHEALARHS SSTTGMELAK 180 AELYQLESII NNACPDSPLS ELTETRGLSL NCGERKQDRG TMCSLESSLT SSESSEQHTM 240 DEAENPQKFN GVSVELPLMS IHPEEDKAFK GDTSDGRKRS AATDSDHCVD QPCGNKLRKS 300 EVSEMLDLNC QYQRDIDSSV KEIDLNFSSS F* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 3e-21 | 20 | 77 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 3e-21 | 20 | 77 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 3e-21 | 20 | 77 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 3e-21 | 20 | 77 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 3e-21 | 20 | 77 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 3e-21 | 20 | 77 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 3e-21 | 20 | 77 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 3e-21 | 20 | 77 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Gma.20625 | 0.0 | leaf| root |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Glyma.07G229800.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT098169 | 0.0 | BT098169.1 Soybean clone JCVI-FLGm-12I23 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001350646.1 | 0.0 | MYB-CC domain-containing transcription factor PHR11 | ||||
Refseq | XP_028241475.1 | 0.0 | myb family transcription factor PHL8-like | ||||
TrEMBL | A0A445K0V7 | 0.0 | A0A445K0V7_GLYSO; Myb family transcription factor PHL8 isoform A | ||||
TrEMBL | I1KMH3 | 0.0 | I1KMH3_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA07G35700.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5218 | 32 | 53 | Representative plant | OGRP78 | 17 | 262 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69580.1 | 1e-75 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Glyma.07G229800.1.p |
Entrez Gene | 100776601 |