PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.07G156200.1.p
Common NameGLYMA_07G156200
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 353aa    MW: 38835.1 Da    PI: 5.7643
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.07G156200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.41.7e-1874131155
                  AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.....krkrfslgkfgtaeeAakaaiaarkkleg 55 
                          ++++GVr++  +g+WvAeIr+p + g     k  r +lg+f ta eAa a+++a+k+++g
  Glyma.07G156200.1.p  74 CKFRGVRQRI-WGKWVAEIREPIN-GklvgeKANRLWLGTFSTALEAALAYDEAAKAMYG 131
                          79*****998.**********855.55976666************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.0E-1374131IPR001471AP2/ERF domain
CDDcd000181.67E-3074140No hitNo description
SMARTSM003806.9E-3375145IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-2775140IPR001471AP2/ERF domain
SuperFamilySSF541716.21E-1875140IPR016177DNA-binding domain
PROSITE profilePS5103221.32575139IPR001471AP2/ERF domain
PRINTSPR003671.3E-87687IPR001471AP2/ERF domain
PRINTSPR003671.3E-8105121IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MKTNNNVSGE RKSRKRRSGE SDSVEDTLEK WKEYNRQQQL GSRENGVEVI HKVPAKGSRK  60
GCMRGKGGPQ NSDCKFRGVR QRIWGKWVAE IREPINGKLV GEKANRLWLG TFSTALEAAL  120
AYDEAAKAMY GPCARLNFPE PIDSNGSSSS SGSDKKSPSG SSENGGDVAI AEELEVNHRR  180
CHEDRPRFSK VGVFEKAEEM PVLSVGCVAD DSIEELKEIS NGFEQCQTSE ECKATSLNDV  240
KSEVPRENEG IEKELEEVLK NSGIGGEGRH LQKEPMDIPM NTRSNFCSSS ASSDAATILI  300
KSEETRGESV ETLNSYELSC SNHCLGYMHN NMLPDTNPRP NSETSIAKKH TE*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-1576139360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11217SRKRRS
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.4870.0somatic embryo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.07G156200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX4403880.0JX440388.1 Glycine max DRE-binding protein 2D;1 (DREB2D;1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028240661.10.0uncharacterized protein LOC114419214
TrEMBLK7L1Z00.0K7L1Z0_SOYBN; Uncharacterized protein
STRINGGLYMA07G19221.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF132862127
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38340.16e-34ERF family protein