PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.07G153900.3.p
Common NameGLYMA_07G153900, LOC102662997
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 367aa    MW: 40992.5 Da    PI: 6.7067
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.07G153900.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.65.1e-3267120255
              G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          prlrWtp+LH rF++av++LGG+e+AtPk +l+lm++kgL+++hvkSHLQ+YR+
  Glyma.07G153900.3.p  67 PRLRWTPDLHLRFIHAVQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRS 120
                          8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.1263123IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.5E-2963121IPR009057Homeodomain-like
SuperFamilySSF466891.79E-1465121IPR009057Homeodomain-like
TIGRFAMsTIGR015576.1E-2367122IPR006447Myb domain, plants
PfamPF002491.1E-968119IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MRMEEERHGS ECSKTSPSNE EGCEEESEGN EDESKPNNNN GGSSSNSTVE ENEKKTTVRP  60
YVRSKMPRLR WTPDLHLRFI HAVQRLGGQE RATPKLVLQL MNIKGLSIAH VKSHLQMYRS  120
KKVDTNQVLA DPRLLVETGD RNVYNLSQLP MLQGYNPSQS SAYRYGYGDA SLAIYENMVH  180
GPFMNRSSLD ESGAEFCGSR LTHGTNSNIN WIHNMFQVDS SSSFNEPSTS KVHEPKHKFF  240
SFGGNESSST QIKMSQVDLH LSTQPQPSAQ ELMPNNKFTT NEMELKTLKR KASDIDLDLN  300
LSLKLNSRVS AENQGSMVDH EVVDSNLSLS LCSQSSSFSS SRLKKAQDHS KEQGEIIRAS  360
TLDLTI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-1768122458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-1768122458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-1768122458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-1768122458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-1768122458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-1768122458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-1768122458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-1768122458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.07G153900.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150373e-77AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006583665.10.0myb family transcription factor EFM isoform X1
RefseqXP_025985036.10.0myb family transcription factor EFM isoform X1
RefseqXP_028240507.10.0myb family transcription factor EFM-like isoform X1
TrEMBLI1KKI30.0I1KKI3_SOYBN; Uncharacterized protein
STRINGGLYMA07G18870.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.11e-57G2-like family protein