PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.07G128700.1.p
Common NameGLYMA_07G128700, LOC100784450
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family HRT-like
Protein Properties Length: 427aa    MW: 48225.6 Da    PI: 9.8423
Description HRT-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.07G128700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HRT-like57.62e-18250280131
             HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                          iCGv+l+dGs+C+r+P+++R RC eHKGmR+
  Glyma.07G128700.1.p 250 ICGVALGDGSICTRPPAEKRMRCPEHKGMRT 280
                          8*****************************5 PP
2HRT-like62.18.2e-20317347131
             HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                          iCG++l+dGs+C+rqPvkgRKRC+eHKG+Ri
  Glyma.07G128700.1.p 317 ICGILLSDGSTCTRQPVKGRKRCHEHKGRRI 347
                          8*****************************7 PP
3HRT-like603.6e-19386416131
             HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                          iCG+il+dGs+C+r+PvkgRKRC+eHKG+Ri
  Glyma.07G128700.1.p 386 ICGIILNDGSTCTRHPVKGRKRCHEHKGRRI 416
                          8*****************************7 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:2000033Biological Processregulation of seed dormancy process
GO:0097100Molecular Functionsupercoiled DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    Send to blast
MALGMSRFKR EQCNRTKHDS SFSHWKILIG PRDWEDHSKG KEGCSRYRIH NLPQQSGPGV  60
YELGIAAAAS VSERKIYKLV PHRHRIVVVY LGQTENVRER LRRYGGNGDH LEDSSLHLFQ  120
QVFSQGFSIL YRWAPMQNKE DALRTETELL STFDYAWNTR SNCVRRPDDI LQKLHQIASG  180
TRTLSDIARA LLPFTQKQVG IQIKSIKLDE ADNGSSYNNL LSRLFSFNRS RPRLVQDITG  240
AIQEQENGKI CGVALGDGSI CTRPPAEKRM RCPEHKGMRT NVSTAKAIIG APMSESHDLE  300
DPPQTVVDES LTNTDYICGI LLSDGSTCTR QPVKGRKRCH EHKGRRIRAA SIQTKDNGYK  360
YQNNVSNDVE DPPQTLVDES ITNTNICGII LNDGSTCTRH PVKGRKRCHE HKGRRIRASF  420
HIANKK*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.234490.0somatic embryo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.07G128700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0973630.0BT097363.1 Soybean clone JCVI-FLGm-16I1 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003529080.10.0protein EFFECTOR OF TRANSCRIPTION 2
TrEMBLI1KJV00.0I1KJV0_SOYBN; Uncharacterized protein
STRINGGLYMA07G15450.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF94093139
Representative plantOGRP52481420
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56780.15e-94effector of transcription2