PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.07G057400.1.p
Common NameGLYMA_07G057400, Glyma07g06320.1
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 370aa    MW: 41352.5 Da    PI: 5.3059
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.07G057400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.56.5e-29130191159
                          ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                          ldDgy+WrKYGqK++ g++fpr+YYrCt++   gC ++k+v++s+edp ++eitY+g+H+++
  Glyma.07G057400.1.p 130 LDDGYSWRKYGQKDILGAKFPRGYYRCTYRnvqGCLATKQVQKSDEDPMICEITYKGRHTCS 191
                          59***************************98989**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.5E-28124192IPR003657WRKY domain
PROSITE profilePS5081122.791125188IPR003657WRKY domain
SuperFamilySSF1182906.28E-25128192IPR003657WRKY domain
SMARTSM007743.7E-40130192IPR003657WRKY domain
PfamPF031065.1E-26131190IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MEENFKCEQV GLIDELMQGK ELAKQLCDHL LVSSSSSSSS HETNEVLIEK ILSTYEKALA  60
MLNCKADVGE SKAKNGSMMD SHCPLTNGSP KSEVLEPEVK NKNVFKKRKT MSKLTEQVKV  120
RLGTAHEGSL DDGYSWRKYG QKDILGAKFP RGYYRCTYRN VQGCLATKQV QKSDEDPMIC  180
EITYKGRHTC SQAGHLNKTV APPSKRKVNF LGANKHQTHQ IKNQIQQEKI EQPPETFFTF  240
GSSGLEVKIE DMDHKEDMFP SFCFSSPLKE GSENGDNNSL FSYTMMENNL MENFSPTFIS  300
PTSSDIESNI FYHWGSTGIG QSVQSSESDI TDIVSAPTSV TNSPIMDLDF FDKIDFDTDF  360
PLIPSELCT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B4e-191291881374Disease resistance protein RRS1
5w3x_D4e-191291881374Disease resistance protein RRS1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.333750.0epicotyl| flower| leaf| meristem| root
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.07G057400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0312340.0KT031234.1 Glycine max clone HN_CCL_106 WRKY transcription factor (Glyma07g06320.1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001242675.20.0WRKY transcription factor 55
TrEMBLI1KHX30.0I1KHX3_SOYBN; WRKY transcription factor
STRINGGLYMA07G06320.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49334157
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.15e-44WRKY family protein
Publications ? help Back to Top
  1. Chai C, et al.
    Soybean transcription factor ORFeome associated with drought resistance: a valuable resource to accelerate research on abiotic stress resistance.
    BMC Genomics, 2015. 16: p. 596
    [PMID:26268547]