PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.07G044300.3.p
Common NameERF7, GLYMA_07G044300
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 393aa    MW: 43190.9 Da    PI: 4.6834
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.07G044300.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.76.7e-19118167255
                  AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                          +y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++a +++++g
  Glyma.07G044300.3.p 118 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFSTAEEAARAYDAEARRIRG 167
                          69*******.**********954...4************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103224.118118175IPR001471AP2/ERF domain
SuperFamilySSF541715.04E-22118176IPR016177DNA-binding domain
CDDcd000181.12E-31118176No hitNo description
Gene3DG3DSA:3.30.730.101.4E-32118176IPR001471AP2/ERF domain
SMARTSM003803.3E-37118181IPR001471AP2/ERF domain
PRINTSPR003671.4E-11119130IPR001471AP2/ERF domain
PfamPF008471.2E-11119167IPR001471AP2/ERF domain
PRINTSPR003671.4E-11141157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    Send to blast
MCGGAIISDF IPAGPAGGAQ RVTADILWPN LRKRFSKSLL DDDFEAGFRE FEDDSEIEDV  60
DDEDDEEEEE LKKKKPFGFS RSNNKAASKP LSRGATTVKS VESKGQAEKC AKRKRKNQYR  120
GIRQRPWGKW AAEIRDPRKG VRVWLGTFST AEEAARAYDA EARRIRGKKA KVNFPDEPSG  180
AASSKRLKAN PEAQPMKKNL NSVKPKINQM FNFGDNLEGY YSPIDQVEQK PLVNQYVNRA  240
PFAGNGVQVS PVTPSADVTA YFSSEHSSSS FDYSDLGWGE QVPKTPEISS MLSAAPLDGE  300
SQFVQGAADQ NQKKNNLLDM ASVQDDSAKT LSEELADIES QLKFFETPSF LDEAWADAAL  360
ASLLSEDASQ DAAGNPMNLW SFDDLPSMAG VF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-201171771374Ethylene-responsive transcription factor ERF096
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.28860.0cotyledon| flower| hypocotyl| leaf| meristem| pod| root| seed coat| somatic embryo| stem
Function -- GeneRIF ? help Back to Top
  1. Overexpression of GmERF7 in tobacco plants led to higher levels of chlorophyll and soluble carbohydrates and a lower level of malondialdehyde compared with wild-type tobacco plants under salt stress conditions, which indicated that GmERF7 enhanced salt tolerance in transgenic plants.
    [PMID: 23111158]
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.07G044300.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJN4166020.0JN416602.1 Glycine max cultivar Jilin 32 ethylene-responsive transcription factor 7 (ERF7) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001341213.10.0ethylene-responsive transcription factor 7
RefseqXP_028239255.10.0ethylene-responsive transcription factor RAP2-12-like
TrEMBLA0A445JS980.0A0A445JS98_GLYSO; Ethylene-responsive transcription factor 1 isoform A
TrEMBLH2D4C40.0H2D4C4_SOYBN; Ethylene-responsive transcription factor 7
STRINGGLYMA07G04950.70.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.29e-41related to AP2 12
Publications ? help Back to Top
  1. Zhai Y, et al.
    Isolation and molecular characterization of GmERF7, a soybean ethylene-response factor that increases salt stress tolerance in tobacco.
    Gene, 2013. 513(1): p. 174-83
    [PMID:23111158]