PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.07G027100.1.p
Common NameGLYMA_07G027100, LOC100777846
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 371aa    MW: 41365.8 Da    PI: 8.479
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.07G027100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.31.5e-09189233554
                          HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                          h + Er+RR+++ ++f  L   +P +     kK +Ka+iL +A+ ++k L
  Glyma.07G027100.1.p 189 HIMTERKRRRELTERFIALSATIPGL-----KKIDKATILSEAITHVKRL 233
                          8999**********************.....9****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.725184233IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.1E-15188258IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.26E-9189238No hitNo description
Gene3DG3DSA:4.10.280.101.4E-14189249IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.4E-7189233IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.5E-10190239IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MGEPCQQYWF SDMEIRDFDF FNQSQNHKIG SLDRDEDRIF REIMMHQPVF SSDSDTHSPK  60
ILSKSIHGGD SGYNTYTALA NNKSSNSNLV MKSNSSNFIF SSQHAPPEKP STATVASPTA  120
YILSFGDSTL VAATRQNYGG KQPYHEEVVV GSGGVCLPSK GVSEKHDVEP TTANQTTKRS  180
RSSAETLDHI MTERKRRREL TERFIALSAT IPGLKKIDKA TILSEAITHV KRLKERVREL  240
EEQCKRTKVE SVSFVHQRPH ITTDKGTTSG AMNSDEWCRT NEALPTVEAR VFKKDVLLRI  300
HCKIQSGILI KILDHLNSLD LSTISNSVMP FGSSTLDISI IAQMGDKFKV TMNDLVKNLR  360
LALLQSSEVQ *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1193197RKRRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.07G027100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003529789.10.0transcription factor bHLH18
TrEMBLK7KZB40.0K7KZB4_SOYBN; Uncharacterized protein
STRINGGLYMA07G03051.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1625679
Representative plantOGRP6561573
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.17e-29bHLH family protein