PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.07G027000.1.p
Common NameGLYMA_07G027000, LOC102660200
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 212aa    MW: 23067.2 Da    PI: 10.8145
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.07G027000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.21.3e-2081131256
                  AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                           y+GVr ++ +grW AeIrd       r r++lg+f+taeeAa+a++aa+++++g+
  Glyma.07G027000.1.p  81 SYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDAAARRMRGA 131
                          69*******.**********32....25**************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.83E-1680139No hitNo description
SMARTSM003801.2E-3281144IPR001471AP2/ERF domain
PROSITE profilePS5103222.45881138IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-2281138IPR016177DNA-binding domain
PfamPF008471.2E-1481130IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.3E-3081138IPR001471AP2/ERF domain
PRINTSPR003677.3E-118293IPR001471AP2/ERF domain
PRINTSPR003677.3E-11104120IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    Send to blast
MNGELFLHAP TTTTTNFLLP KKSQTASSET LDPSQKLRRY ETALEGIAAV VGEHVLFGTT  60
LSHVSETPKK TNGVSSSLSK SYRGVRKRPW GRWSAEIRDR IGRCRHWLGT FDTAEEAARA  120
YDAAARRMRG AKARTNFKIP SVLPLSPEGV HGSAVKPKTA RSNARKCSSV EQLFSGVPQL  180
RKDDGIGENG NVEVDLKLGV NFGVTSSRMV L*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1773137771Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.07G027000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006583113.11e-155ethylene-responsive transcription factor ERF084
RefseqXP_028238561.11e-155ethylene-responsive transcription factor ERF084-like
TrEMBLA0A445JRC01e-154A0A445JRC0_GLYSO; Ethylene-responsive transcription factor ERF084
TrEMBLK7KZB31e-154K7KZB3_SOYBN; Uncharacterized protein
STRINGGLYMA07G03041.11e-155(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF130232631
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.12e-25ERF family protein