PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.06G320700.1.p
Common NameGLYMA_06G320700, LOC100127395
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 777aa    MW: 84821 Da    PI: 6.577
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.06G320700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.52e-31324380259
                          --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                          +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers+ +++++ei+Y+g+H+h 
  Glyma.06G320700.1.p 324 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSH-EGHITEIIYKGTHDHA 380
                          7****************************************.***************7 PP
2WRKY102.72.1e-32537595159
                          ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                          ldDgy+WrKYGqK+vkg+++prsYY+Ct agC+v+k+ver+++d k v++tYeg+Hnh+
  Glyma.06G320700.1.p 537 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHD 595
                          59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-27321382IPR003657WRKY domain
SuperFamilySSF1182901.31E-24322382IPR003657WRKY domain
SMARTSM007742.8E-34323381IPR003657WRKY domain
PfamPF031066.0E-24324379IPR003657WRKY domain
PROSITE profilePS5081122.171324382IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.0E-36522597IPR003657WRKY domain
SuperFamilySSF1182902.22E-28529597IPR003657WRKY domain
PROSITE profilePS5081138.32532597IPR003657WRKY domain
SMARTSM007741.9E-37537596IPR003657WRKY domain
PfamPF031068.1E-25538595IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 777 aa     Download sequence    Send to blast
MAGIDDNVAL TGDWGLASPS PRTFFSRMLE EDSVTRSISE HSGSGRTGDP FSGHREPSEM  60
RKENMKDRAQ DGDSGAQLTD VSFQTEQKPS SRGGLVERMA ARAGFNAPRL NTESIRSTDL  120
SLNSDIQSPY LTIPPGLSPT TLLDSPVFLA NSLAQPSPTT GKFLFMVNGN MRHSELSSDA  180
PEKCKHNGFD DIYTSSFAFK PATDSGSSFY HGAGRKINPT TLPQQSLPGV EVSAQSENSF  240
QCQSVDAVKA QTENKSGLHL QEDFVESPPQ KDNGIKMFSA NQRAFHAVGS GIEHSTPVEE  300
QADEEGDQRV NGDSMAGGVG APSEDGYNWR KYGQKQVKGS EYPRSYYKCT HPNCQVKKKV  360
ERSHEGHITE IIYKGTHDHA KPPPNRRSSI GSVNLHTDMQ VDNPEHVEPH NGGDGDLGWA  420
NVQKGNIAGA ANWKHENIEA TSSASVGPEY CNQSPNLQAQ NGTHLDSGEA VDASSTFSNE  480
EDDQVTHGSV SLGYDGEGDE SESKRRKLES YAELSGATRA IREPRVVVQT TSEVDILDDG  540
YRWRKYGQKV VKGNPNPRSY YKCTNAGCTV RKHVERASHD LKSVITTYEG KHNHDVPAAR  600
ASSHVNANAS NAVPGQASLQ THVHRPEPSQ VHNGIGRLER PSLGSFNLPG RQQLGPSHGF  660
SFGMNQSMLS NLVMSGLGHA QAKLPVMPVH PFLAAQQQHQ QRQQHQQQQQ HQQQQQQHQQ  720
QQQHQQQQCA ANDLGFMLPK GEPNVEAIPE HGGLNLSNGS SVYQEMMSRM PLGPHM*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-36312598178Probable WRKY transcription factor 4
2lex_A2e-36312598178Probable WRKY transcription factor 4
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.219350.0somatic embryo| stem
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.06G320700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU0195890.0EU019589.1 Glycine max WRKY59 (WRKY59) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003526383.10.0probable WRKY transcription factor 2
RefseqXP_014632368.10.0probable WRKY transcription factor 2
TrEMBLK7KYM60.0K7KYM6_SOYBN; Uncharacterized protein
STRINGGLYMA06G47880.30.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF95243443
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.11e-180WRKY DNA-binding protein 2