PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.06G307700.1.p
Common NameGLYMA_06G307700, LOC100795177
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 629aa    MW: 68034.8 Da    PI: 6.0377
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.06G307700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.86e-30348406259
                          --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                           Dg++WrKYGqK+ kg+++pr+YYrC++a  Cpv+k+v+r+aed +v+++tYeg+Hnh+
  Glyma.06G307700.1.p 348 ADGCQWRKYGQKMAKGNPCPRAYYRCSMAsACPVRKQVQRCAEDRTVLITTYEGNHNHP 406
                          7***************************999***************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.0E-32332408IPR003657WRKY domain
SuperFamilySSF1182901.14E-26340408IPR003657WRKY domain
PROSITE profilePS5081128.805342408IPR003657WRKY domain
SMARTSM007746.2E-35347407IPR003657WRKY domain
PfamPF031065.3E-26349406IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 629 aa     Download sequence    Send to blast
MVRGGGLQSM DSDPIGSFFL HKPIVLNSFP AEDTNNKWKK LSLHHNMDAT ASNTKDNTIP  60
FQVSLRCSPN NHDDASSPPS LHNNRTEMDL FSDKNSTKDD DNNNNKVDAS ASLPDNDHHS  120
TTPPTLEFKL NTGGLNLLTT NTNSDQSMVD DEISPNSEDK RAKNEMAVLQ ADLERMKREN  180
QKLRDSLDEV TTNYSALQMH FMNLMQERKG EEGEEEQEEV YGGEKKQQLG ESGGDGILVP  240
RQFMDLGLAA NNGTSTGIEP SSSSGGRSQD RSRSPNVEVA SKELGTNDEE EKKEYGRGIE  300
REDDSPSGHA HKVPRFSPPK DNNSVEAEAT MRKARVSVRA RSETPMIADG CQWRKYGQKM  360
AKGNPCPRAY YRCSMASACP VRKQVQRCAE DRTVLITTYE GNHNHPLPPT AMAMAQTTSS  420
AARMLLSGSM SSADSIMNAN FLTGTLLPCS SSMATISASA PFPTVTLDLT HSPNPLQFPR  480
QQHPNQLQIG VPQNNFANSP AASLLPQIFG QALYNNQSKF SGLQMSSSHY DADPSSQFGN  540
NQLPPHQVVP PHLADTVGAA IATDPNFTAA LAAAITSIIG GAPLQHSNSS NNNNSNSNNK  600
GNMTANNSNN GNGNVASSSN NNCNNGKQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-21334409175WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.06G307700.1.p
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003526336.10.0probable WRKY transcription factor 31
TrEMBLK7KYC60.0K7KYC6_SOYBN; Uncharacterized protein
STRINGGLYMA06G46420.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF86634121
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-106WRKY family protein