PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.06G219800.2.p
Common NameGLYMA_06G219800
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 334aa    MW: 36922.8 Da    PI: 9.0504
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.06G219800.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY74.51.3e-232682259
                         --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                         +DgynWrKYGqK+vk+   +rsYYrCt++ C++kk ++ +++ ++v+ei+Y+++H h+
  Glyma.06G219800.2.p 26 SDGYNWRKYGQKQVKSPMGSRSYYRCTHSYCCAKK-IKFCDHSGHVIEIVYKSQHSHD 82
                         7********************************98.999999***************7 PP
2WRKY92.33.6e-29196252359
                          -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                          Dgy+WrKYGqK vkg+++ r+YYrCt+agCpv+k++e++ ++ k+++itY+g H+h+
  Glyma.06G219800.2.p 196 DGYRWRKYGQKLVKGNPHFRNYYRCTTAGCPVRKHIETAVDNSKALIITYKGMHDHD 252
                          9*******************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.0E-201484IPR003657WRKY domain
SuperFamilySSF1182904.05E-192484IPR003657WRKY domain
SMARTSM007742.2E-212583IPR003657WRKY domain
PROSITE profilePS5081116.9372684IPR003657WRKY domain
PfamPF031066.2E-172782IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.5E-30179254IPR003657WRKY domain
SuperFamilySSF1182904.05E-26188254IPR003657WRKY domain
PROSITE profilePS5081130.526189254IPR003657WRKY domain
SMARTSM007744.3E-32194253IPR003657WRKY domain
PfamPF031068.3E-23196251IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MTLPLICREA LPHVRVEKLR VRASASDGYN WRKYGQKQVK SPMGSRSYYR CTHSYCCAKK  60
IKFCDHSGHV IEIVYKSQHS HDPPHKIDTA KESKLLPSSE PKVESSVSKH STNVLNDSDP  120
SSSPKELLQE TPCSGDKNLE NSSNVENGKI ILNDEHVNDP EPKRRLNNSD LDTAVKPGKK  180
TKFVVHATKD VGISGDGYRW RKYGQKLVKG NPHFRNYYRC TTAGCPVRKH IETAVDNSKA  240
LIITYKGMHD HDMPVPKKRH GPPSASLVAA AAPASTNNVQ LKKTGLLQNQ ETEAQCLEDT  300
EGELTGEALD LGGEKAIESA RTLLSIGFEI KPC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-25181254174WRKY transcription factor 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.625180.0hypocotyl
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.06G219800.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0312550.0KT031255.1 Glycine max clone HN_CCL_20 WRKY transcription factor (Glyma06g27440.3) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001304613.20.0probable WRKY transcription factor 32
RefseqXP_028223005.10.0probable WRKY transcription factor 32
SwissprotP595831e-117WRK32_ARATH; Probable WRKY transcription factor 32
TrEMBLA0A0R0JKD50.0A0A0R0JKD5_SOYBN; Uncharacterized protein
STRINGGLYMA06G27440.30.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.11e-107WRKY DNA-binding protein 32