PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.05G168100.1.p
Common NameGLYMA_05G168100, LOC100813098
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 376aa    MW: 42169.6 Da    PI: 8.3944
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.05G168100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.23.6e-082442901763
                          HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                          A+rsR RK+++i+eLe+ v++L+ae ++   ele l+++   l +e+
  Glyma.05G168100.1.p 244 AQRSRVRKLQYIAELERNVQVLQAEGSEVSAELEFLNQQNLILSMEN 290
                          89***********************************9998887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.3E-4233292IPR004827Basic-leucine zipper domain
CDDcd147031.99E-16235283No hitNo description
Gene3DG3DSA:1.20.5.1702.4E-5244286No hitNo description
SuperFamilySSF579595.0E-6244286No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    Send to blast
MANSKGSSGF RNFMYPGKHP LLPPKSPFPS VSQAYADYVP NPAVGLKAGN RPRDGNTHHQ  60
RTSSESLVIE EQPSWLDDLL NEPETPVRRG GHRRSSSDSF AYIDTVNASN INYANQDEYK  120
YKNMMSIPSW SSQDFDRSKD ARHVPVYAEM NSVKQKNRSW DSFSNAMTNP VGVPSGKDSA  180
AFQSSGLQCT PHEADGLPPA SSEKHDSVES GLQDAKPFPE KKDSSHAKSS ASETDTKRAK  240
QQFAQRSRVR KLQYIAELER NVQVLQAEGS EVSAELEFLN QQNLILSMEN KALKQRLENI  300
AQEQLIKYLE QEVLEREIGR LRALYQQQQQ PQTQPQQQPS GSHRRTNSRD LESQFANLSL  360
KHKDTNSGQD PALRI*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.47310.0cotyledon| leaf| root| seed coat| somatic embryo| stem
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.05G168100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2353040.0AC235304.1 Glycine max strain Williams 82 clone GM_WBb0065N07, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003525005.10.0uncharacterized protein At4g06598
RefseqXP_014631213.10.0uncharacterized protein At4g06598
RefseqXP_028232969.10.0uncharacterized protein At4g06598-like
RefseqXP_028232970.10.0uncharacterized protein At4g06598-like
TrEMBLA0A445KQ690.0A0A445KQ69_GLYSO; Uncharacterized protein
TrEMBLK7KQP30.0K7KQP3_SOYBN; Uncharacterized protein
STRINGGLYMA05G30170.30.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51232637
Representative plantOGRP42521219
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.21e-112bZIP family protein
Publications ? help Back to Top
  1. Liao Y, et al.
    Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis.
    Planta, 2008. 228(2): p. 225-40
    [PMID:18365246]