PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Glyma.05G122400.1.p | ||||||||
Common Name | GLYMA_05G122400 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bZIP | ||||||||
Protein Properties | Length: 225aa MW: 24619.9 Da PI: 9.7695 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 45.1 | 2.1e-14 | 140 | 197 | 2 | 59 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 + l++ rr++kNRe+A rsR+RK+a++ eLe v +Le+eN +L ke e++ + +k+ Glyma.05G122400.1.p 140 ATLQKLRRMIKNRESAARSRERKQAYTSELEYLVHQLEQENARLLKEEAEMRRQRKKH 197 57899***************************************99988888777765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 8.7E-14 | 139 | 203 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.1E-12 | 140 | 195 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.174 | 141 | 193 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 3.70E-18 | 143 | 190 | No hit | No description |
SuperFamily | SSF57959 | 1.75E-10 | 143 | 194 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.5E-13 | 144 | 195 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 146 | 161 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence Send to blast |
MASSKLVSTN PDLPRDPSSS SSSSSSISPL SSLLSDLHPM DDLLKSITPN SVDDFWKGIA 60 AASTDNAGGV TLEDFLTKAI PVTEEDVRGA PPPPPSFLPF PAEGSSSSVE PFANNGVGSA 120 PSNSVQKGKR RAVEEPVDKA TLQKLRRMIK NRESAARSRE RKQAYTSELE YLVHQLEQEN 180 ARLLKEEAEM RRQRKKHLFE CIIPIEVMPK PKKKLRRVNS AQSL* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 209 | 215 | KPKKKLR |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Gma.28682 | 0.0 | hypocotyl |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Glyma.05G122400.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006579488.1 | 1e-161 | bZIP transcription factor bZIP9 isoform X1 | ||||
Refseq | XP_028232363.1 | 1e-161 | bZIP transcription factor 12-like isoform X1 | ||||
TrEMBL | A0A445KMZ3 | 1e-160 | A0A445KMZ3_GLYSO; BZIP transcription factor 12 isoform A | ||||
TrEMBL | K7KPT9 | 1e-160 | K7KPT9_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA05G25200.3 | 1e-161 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2028 | 34 | 81 | Representative plant | OGRP8662 | 7 | 15 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G03970.1 | 2e-26 | G-box binding factor 4 |
Link Out ? help Back to Top | |
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Phytozome | Glyma.05G122400.1.p |
Entrez Gene | 778147 |
Publications ? help Back to Top | |||
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