PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.05G049800.1.p
Common NameGLYMA_05G049800, LOC100793589
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 183aa    MW: 19693.1 Da    PI: 4.6548
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.05G049800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2445.6e-141563255
                  AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                          y+G+r ++  g+Wv eIr+p++   + r++lg+f t+e+Aa+a++ a+++l+g
  Glyma.05G049800.1.p 15 LYHGIR-CR-GGKWVTEIREPRK---TNRIWLGTFLTPEMAAAAYDVAALALKG 63
                         699999.55.7*********854...49**********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.24E-131473No hitNo description
PfamPF008471.1E-71463IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-241573IPR001471AP2/ERF domain
SMARTSM003801.1E-231577IPR001471AP2/ERF domain
PROSITE profilePS5103218.3071571IPR001471AP2/ERF domain
SuperFamilySSF541711.24E-161573IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MASSSSLSSS KRHPLYHGIR CRGGKWVTEI REPRKTNRIW LGTFLTPEMA AAAYDVAALA  60
LKGGEAVLNF PDSVGGYPVP ASKSPADIRT AAIAAAELMK PEASHNNNNV NASTTNEAEV  120
VQYDNNNVFT SFDTEFMDEE AIFSMPSLLV DMAGGMLLSP PRMSPPSDDS TQSYVGETLW  180
NF*
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00558DAPTransfer from AT5G52020Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.05G049800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003525731.11e-133ethylene-responsive transcription factor ERF026
RefseqXP_028231652.11e-133ethylene-responsive transcription factor ERF026-like
SwissprotQ9CAN91e-45ERF26_ARATH; Ethylene-responsive transcription factor ERF026
TrEMBLA0A445KKE31e-132A0A445KKE3_GLYSO; Ethylene-responsive transcription factor ERF026
TrEMBLK7KMY21e-132K7KMY2_SOYBN; Uncharacterized protein
STRINGGLYMA05G03540.21e-133(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.11e-31ERF family protein